RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 FASTKD3Q14CZ7 662 aaKnown RBP20.82■□□□□ 0.92
CLDND1-201ENST00000341181 HP1BP3Q5SSJ5 553 aaPredicted RBP20.82■□□□□ 0.92
CLDND1-201ENST00000341181 CAMK1DQ8IU85 385 aa20.82■□□□□ 0.92
CLDND1-201ENST00000341181 ZNF513Q8N8E2 541 aaPredicted RBP20.82■□□□□ 0.92
CLDND1-201ENST00000341181 GRIN3AQ8TCU5 1115 aa20.82■□□□□ 0.92
CLDND1-201ENST00000341181 UBLCP1Q8WVY7 318 aaPredicted RBP20.82■□□□□ 0.92
CLDND1-201ENST00000341181 ARL8AQ96BM9 186 aa20.82■□□□□ 0.92
CLDND1-201ENST00000341181 LRRC40Q9H9A6 602 aa20.82■□□□□ 0.92
CLDND1-201ENST00000341181 VPS45Q9NRW7 570 aa20.82■□□□□ 0.92
CLDND1-201ENST00000341181 STARD13Q9Y3M8 1113 aa20.82■□□□□ 0.92
CLDND1-201ENST00000341181 PDHA1P08559 390 aa20.82■□□□□ 0.92
CLDND1-201ENST00000341181 NNMTP40261 264 aa20.82■□□□□ 0.92
CLDND1-201ENST00000341181 SNRPD1P62314 119 aaKnown RBP20.82■□□□□ 0.92
CLDND1-201ENST00000341181 MPP3Q13368 585 aa20.82■□□□□ 0.92
CLDND1-201ENST00000341181 PREPLQ4J6C6 727 aaPredicted RBP20.82■□□□□ 0.92
CLDND1-201ENST00000341181 C2orf27AQ580R0 203 aa20.82■□□□□ 0.92
CLDND1-201ENST00000341181 CFAP58Q5T655 872 aa20.82■□□□□ 0.92
CLDND1-201ENST00000341181 ATXN2LQ8WWM7 1075 aaKnown RBP20.82■□□□□ 0.92
CLDND1-201ENST00000341181 NECAB3Q96P71 396 aaPredicted RBP20.82■□□□□ 0.92
CLDND1-201ENST00000341181 TBL1YQ9BQ87 522 aa20.82■□□□□ 0.92
CLDND1-201ENST00000341181 TDRD1Q9BXT4 1180 aaKnown RBP20.82■□□□□ 0.92
CLDND1-201ENST00000341181 TXLNGYQ9BZA5 131 aa20.82■□□□□ 0.92
CLDND1-201ENST00000341181 ZDHHC6Q9H6R6 413 aa20.82■□□□□ 0.92
CLDND1-201ENST00000341181 PLAAQ9Y263 795 aa20.82■□□□□ 0.92
CLDND1-201ENST00000341181 RNF40O75150 1001 aa20.81■□□□□ 0.92
CLDND1-201ENST00000341181 GSRP00390 522 aa20.81■□□□□ 0.92
CLDND1-201ENST00000341181 VASPP50552 380 aaPredicted RBP20.81■□□□□ 0.92
CLDND1-201ENST00000341181 CRADDP78560 199 aa20.81■□□□□ 0.92
CLDND1-201ENST00000341181 CAV1Q03135 178 aa20.81■□□□□ 0.92
CLDND1-201ENST00000341181 GALNT3Q14435 633 aa20.81■□□□□ 0.92
CLDND1-201ENST00000341181 MLF2Q15773 248 aaPredicted RBP20.81■□□□□ 0.92
CLDND1-201ENST00000341181 HIF1AQ16665 826 aa20.81■□□□□ 0.92
CLDND1-201ENST00000341181 HNRNPA1L2Q32P51 320 aaKnown RBP20.81■□□□□ 0.92
CLDND1-201ENST00000341181 CARD16Q5EG05 197 aa20.81■□□□□ 0.92
CLDND1-201ENST00000341181 DENND5AQ6IQ26 1287 aa20.81■□□□□ 0.92
CLDND1-201ENST00000341181 SUGP1Q8IWZ8 645 aaKnown RBP20.81■□□□□ 0.92
CLDND1-201ENST00000341181 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.81■□□□□ 0.92
CLDND1-201ENST00000341181 FAM3CQ92520 227 aa20.81■□□□□ 0.92
CLDND1-201ENST00000341181 SMIM14Q96QK8 99 aa20.81■□□□□ 0.92
CLDND1-201ENST00000341181 HAUS2Q9NVX0 235 aa20.81■□□□□ 0.92
CLDND1-201ENST00000341181 CHKBQ9Y259 395 aa20.81■□□□□ 0.92
CLDND1-201ENST00000341181 RAI2Q9Y5P3 530 aa20.81■□□□□ 0.92
CLDND1-201ENST00000341181 ERI2A8K979 691 aaKnown RBP20.8■□□□□ 0.92
CLDND1-201ENST00000341181 CTSLP07711 333 aa20.8■□□□□ 0.92
CLDND1-201ENST00000341181 MAGEA3P43357 314 aa20.8■□□□□ 0.92
CLDND1-201ENST00000341181 AP1S1P61966 158 aa20.8■□□□□ 0.92
CLDND1-201ENST00000341181 CHPFQ8IZ52 775 aa20.8■□□□□ 0.92
CLDND1-201ENST00000341181 SLC25A41Q8N5S1 370 aa20.8■□□□□ 0.92
CLDND1-201ENST00000341181 MCUQ8NE86 351 aa20.8■□□□□ 0.92
CLDND1-201ENST00000341181 PDCD6IPQ8WUM4 868 aaKnown RBP20.8■□□□□ 0.92
CLDND1-201ENST00000341181 UCMAQ8WVF2 138 aa20.8■□□□□ 0.92
CLDND1-201ENST00000341181 TRIB3Q96RU7 358 aa20.8■□□□□ 0.92
CLDND1-201ENST00000341181 EPB41L4BQ9H329 900 aa20.8■□□□□ 0.92
CLDND1-201ENST00000341181 NDRG2Q9UN36 371 aaKnown RBP20.8■□□□□ 0.92
CLDND1-201ENST00000341181 KRBA1A5PL33 1030 aa20.8■□□□□ 0.92
CLDND1-201ENST00000341181 PRLP01236 227 aa20.8■□□□□ 0.92
CLDND1-201ENST00000341181 TNFRSF4P43489 277 aa20.8■□□□□ 0.92
CLDND1-201ENST00000341181 CDK16Q00536 496 aa20.8■□□□□ 0.92
CLDND1-201ENST00000341181 GRSF1Q12849 480 aaKnown RBP eCLIP20.8■□□□□ 0.92
CLDND1-201ENST00000341181 GPS2Q13227 327 aa20.8■□□□□ 0.92
CLDND1-201ENST00000341181 CCINQ13939 588 aa20.8■□□□□ 0.92
CLDND1-201ENST00000341181 MYLK3Q32MK0 819 aa20.8■□□□□ 0.92
CLDND1-201ENST00000341181 HSP90B2PQ58FF3 399 aa20.8■□□□□ 0.92
CLDND1-201ENST00000341181 RANBP10Q6VN20 620 aa20.8■□□□□ 0.92
CLDND1-201ENST00000341181 MPP5Q8N3R9 675 aa20.8■□□□□ 0.92
CLDND1-201ENST00000341181 TRIM56Q9BRZ2 755 aaKnown RBP20.8■□□□□ 0.92
CLDND1-201ENST00000341181 ACBD3Q9H3P7 528 aa20.8■□□□□ 0.92
CLDND1-201ENST00000341181 ARHGEF3Q9NR81 526 aa20.8■□□□□ 0.92
CLDND1-201ENST00000341181 MUTYHQ9UIF7 546 aa20.8■□□□□ 0.92
CLDND1-201ENST00000341181 MYLKQ15746 1914 aa20.8■□□□□ 0.92
CLDND1-201ENST00000341181 GOLGA6CA6NDK9 693 aa20.79■□□□□ 0.92
CLDND1-201ENST00000341181 SIN3BO75182 1162 aa20.79■□□□□ 0.92
CLDND1-201ENST00000341181 PRKCGP05129 697 aa20.79■□□□□ 0.92
CLDND1-201ENST00000341181 ATXN1LP0C7T5 689 aaKnown RBP20.79■□□□□ 0.92
CLDND1-201ENST00000341181 GOLGA6DP0CG33 693 aa20.79■□□□□ 0.92
CLDND1-201ENST00000341181 GLULP15104 373 aa20.79■□□□□ 0.92
CLDND1-201ENST00000341181 CSNK1DP48730 415 aa20.79■□□□□ 0.92
CLDND1-201ENST00000341181 SESN2P58004 480 aaPredicted RBP20.79■□□□□ 0.92
CLDND1-201ENST00000341181 C9orf64Q5T6V5 341 aa20.79■□□□□ 0.92
CLDND1-201ENST00000341181 DENND2CQ68D51 928 aa20.79■□□□□ 0.92
CLDND1-201ENST00000341181 NUDT18Q6ZVK8 323 aa20.79■□□□□ 0.92
CLDND1-201ENST00000341181 ZSWIM9Q86XI8 627 aa20.79■□□□□ 0.92
CLDND1-201ENST00000341181 FAM129AQ9BZQ8 928 aa20.79■□□□□ 0.92
CLDND1-201ENST00000341181 GOLGA6AQ9NYA3 693 aa20.79■□□□□ 0.92
CLDND1-201ENST00000341181 MTRF1LQ9UGC7 380 aaKnown RBP20.79■□□□□ 0.92
CLDND1-201ENST00000341181 NFS1Q9Y697 457 aa20.79■□□□□ 0.92
CLDND1-201ENST00000341181 STON1Q9Y6Q2 735 aa20.79■□□□□ 0.92
CLDND1-201ENST00000341181 WASF2Q9Y6W5 498 aa20.79■□□□□ 0.92
CLDND1-201ENST00000341181 TRAFD1O14545 582 aaPredicted RBP20.79■□□□□ 0.92
CLDND1-201ENST00000341181 PPFIA2O75334 1257 aa20.79■□□□□ 0.92
CLDND1-201ENST00000341181 EPHX1P07099 455 aa20.79■□□□□ 0.92
CLDND1-201ENST00000341181 HNRNPLP14866 589 aaKnown RBP eCLIP20.79■□□□□ 0.92
CLDND1-201ENST00000341181 TPH1P17752 444 aa20.79■□□□□ 0.92
CLDND1-201ENST00000341181 CDK18Q07002 472 aa20.79■□□□□ 0.92
CLDND1-201ENST00000341181 PTPRRQ15256 657 aa20.79■□□□□ 0.92
CLDND1-201ENST00000341181 SLC1A5Q15758 541 aa20.79■□□□□ 0.92
CLDND1-201ENST00000341181 BBS9Q3SYG4 887 aa20.79■□□□□ 0.92
CLDND1-201ENST00000341181 TTMPQ5BVD1 217 aa20.79■□□□□ 0.92
CLDND1-201ENST00000341181 SIRPB2Q5JXA9 342 aa20.79■□□□□ 0.92
CLDND1-201ENST00000341181 ALS2CLQ60I27 953 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms