RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 BRAT1Q6PJG6 821 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 ARHGAP36Q6ZRI8 547 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 TRABD2AQ86V40 505 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 KIRREL3Q8IZU9 778 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 PHTF2Q8N3S3 785 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 TMIEQ8NEW7 156 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 FBF1Q8TES7 1133 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 WBP2Q969T9 261 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 TCEAL4Q96EI5 215 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 IFT43Q96FT9 208 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 ZFP14Q9HCL3 533 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 NT5MQ9NPB1 228 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 VPS28Q9UK41 221 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 MTCH2Q9Y6C9 303 aa7.25□□□□□ -1.25
NUP43-201ENST00000340413 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.24□□□□□ -1.25
NUP43-201ENST00000340413 ZCWPW2A0A1B0GU75 182 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 F8W8V4 182 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 RFPL2O75678 378 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 CYP17A1P05093 508 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 APOA4P06727 396 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 GSTM1P09488 218 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 IRF1P10914 325 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 TEAD1P28347 426 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 DCDC1P59894 354 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 GSTM4Q03013 218 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 SKIDA1Q1XH10 827 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 AARS2Q5JTZ9 985 aaKnown RBP7.24□□□□□ -1.25
NUP43-201ENST00000340413 TFAP2DQ7Z6R9 452 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 CCDC25Q86WR0 208 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 TRIM42Q8IWZ5 723 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 OR2AP1Q8NGE2 309 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 GRIN3AQ8TCU5 1115 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 HEXDCQ8WVB3 486 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 MYEOVQ96EZ4 313 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 MCCC1Q96RQ3 725 aaPredicted RBP7.24□□□□□ -1.25
NUP43-201ENST00000340413 VPS37BQ9H9H4 285 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 HCFC1R1Q9NWW0 138 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 CLEC1BQ9P126 229 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 SUN2Q9UH99 717 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 FAM50BQ9Y247 325 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 IKBKGQ9Y6K9 419 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 PLXNA2O75051 1894 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 HTTP42858 3142 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 EPOPA6NHQ4 379 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 NR1D1P20393 614 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 SERPINA4P29622 427 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 SPRP35270 261 aaPredicted RBP7.24□□□□□ -1.25
NUP43-201ENST00000340413 PPARGP37231 505 aaPredicted RBP7.24□□□□□ -1.25
NUP43-201ENST00000340413 NNMTP40261 264 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 SGSHP51688 502 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 POLR2LP62875 67 aaKnown RBP7.24□□□□□ -1.25
NUP43-201ENST00000340413 ECT2LQ008S8 904 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 SFSWAPQ12872 951 aaKnown RBP7.24□□□□□ -1.25
NUP43-201ENST00000340413 CARD16Q5EG05 197 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 FAM78AQ5JUQ0 283 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 C22orf39Q6P5X5 142 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 ZNF765Q7L2R6 523 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 RDH11Q8TC12 318 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 AGAP3Q96P47 875 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 PAFAH2Q99487 392 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 FICDQ9BVA6 458 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 PLAC1Q9HBJ0 212 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 SYBUQ9NX95 663 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 CD207Q9UJ71 328 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 ERVW-1Q9UQF0 538 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 MYLKQ15746 1914 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 H3BQF6 201 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 TRAFD1O14545 582 aaPredicted RBP7.24□□□□□ -1.25
NUP43-201ENST00000340413 PGLSO95336 258 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 INHBAP08476 426 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 SPATA31D3P0C874 917 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 KRT15P19012 456 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 POLR2EP19388 210 aaKnown RBP7.24□□□□□ -1.25
NUP43-201ENST00000340413 MGAT1P26572 445 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 CLCN5P51795 746 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 KPNA2P52292 529 aaKnown RBP7.24□□□□□ -1.25
NUP43-201ENST00000340413 MRPS25P82663 173 aaKnown RBP7.24□□□□□ -1.25
NUP43-201ENST00000340413 TYSND1Q2T9J0 566 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 RARS2Q5T160 578 aaKnown RBP7.24□□□□□ -1.25
NUP43-201ENST00000340413 AFTPHQ6ULP2 937 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 SPATA31D4Q6ZUB0 917 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 TRMT11Q7Z4G4 463 aaKnown RBP7.24□□□□□ -1.25
NUP43-201ENST00000340413 AGGF1Q8N302 714 aaeCLIP7.24□□□□□ -1.25
NUP43-201ENST00000340413 SMRP1Q8NCR6 262 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 C2CD4AQ8NCU7 369 aaPredicted RBP7.24□□□□□ -1.25
NUP43-201ENST00000340413 OR7D4Q8NG98 312 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 FGF13Q92913 245 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 FAM131CQ96AQ9 280 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 CYP2S1Q96SQ9 504 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 SEMA3CQ99985 751 aa7.24□□□□□ -1.25
NUP43-201ENST00000340413 GOLGA8CPA6NN73 597 aa7.23□□□□□ -1.25
NUP43-201ENST00000340413 EIF3FO00303 357 aaPredicted RBP7.23□□□□□ -1.25
NUP43-201ENST00000340413 H2AFYO75367 372 aaKnown RBP7.23□□□□□ -1.25
NUP43-201ENST00000340413 RPP40O75818 363 aaKnown RBP7.23□□□□□ -1.25
NUP43-201ENST00000340413 PRAMEF12O95522 483 aa7.23□□□□□ -1.25
NUP43-201ENST00000340413 PYGLP06737 847 aa7.23□□□□□ -1.25
NUP43-201ENST00000340413 SRCP12931 536 aa7.23□□□□□ -1.25
NUP43-201ENST00000340413 TYRP14679 529 aa7.23□□□□□ -1.25
NUP43-201ENST00000340413 RHOAP61586 193 aa7.23□□□□□ -1.25
NUP43-201ENST00000340413 CERS6Q6ZMG9 384 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms