RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 RHOJQ9H4E5 214 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 RRN3Q9NYV6 651 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 MYRFQ9Y2G1 1151 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 PRDX6P30041 224 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 GRM5P41594 1212 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 PTPRCAPQ14761 206 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 ZIK1Q3SY52 487 aaPredicted RBP16.27■□□□□ 0.2
SCARB1-202ENST00000339570 GPR107Q5VW38 600 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 XKR5Q6UX68 686 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 CLEC20AQ6ZU45 233 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 ZDHHC17Q8IUH5 632 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 TMEM151AQ8N4L1 468 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 HDAC11Q96DB2 347 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 SNX27Q96L92 541 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 SEPHS2Q99611 448 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 C1QTNF1Q9BXJ1 281 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 ZNF408Q9H9D4 720 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 CASS4Q9NQ75 786 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 MPP6Q9NZW5 540 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 ADAM28Q9UKQ2 775 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 TTC3P53804 2025 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 SIX3O95343 332 aaPredicted RBP16.27■□□□□ 0.2
SCARB1-202ENST00000339570 NPR3P17342 541 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 EEF1B2P24534 225 aaKnown RBP16.27■□□□□ 0.2
SCARB1-202ENST00000339570 DPYSQ14117 519 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 PLA2G4EQ3MJ16 856 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 TBCELQ5QJ74 424 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 PDZD4Q76G19 769 aaPredicted RBP16.27■□□□□ 0.2
SCARB1-202ENST00000339570 APOBEC3FQ8IUX4 373 aaKnown RBP16.27■□□□□ 0.2
SCARB1-202ENST00000339570 CATSPER1Q8NEC5 780 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 KCNA7Q96RP8 456 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 GPR22Q99680 433 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 RBM38Q9H0Z9 239 aaKnown RBP16.27■□□□□ 0.2
SCARB1-202ENST00000339570 GBA3Q9H227 469 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 NDFIP2Q9NV92 336 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 CACNA2D2Q9NY47 1150 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 CLEC11AQ9Y240 323 aa16.27■□□□□ 0.2
SCARB1-202ENST00000339570 NCF1BA6NI72 391 aaPredicted RBP16.27■□□□□ 0.19
SCARB1-202ENST00000339570 NCF1CA8MVU1 366 aaPredicted RBP16.27■□□□□ 0.19
SCARB1-202ENST00000339570 NCF1P14598 390 aaPredicted RBP16.27■□□□□ 0.19
SCARB1-202ENST00000339570 TAF6P49848 677 aa16.27■□□□□ 0.19
SCARB1-202ENST00000339570 SULT2A1Q06520 285 aa16.27■□□□□ 0.19
SCARB1-202ENST00000339570 ZNF484Q5JVG2 852 aa16.27■□□□□ 0.19
SCARB1-202ENST00000339570 TWF2Q6IBS0 349 aaKnown RBP16.27■□□□□ 0.19
SCARB1-202ENST00000339570 KLC3Q6P597 504 aa16.27■□□□□ 0.19
SCARB1-202ENST00000339570 SLC27A1Q6PCB7 646 aa16.27■□□□□ 0.19
SCARB1-202ENST00000339570 CUZD1Q86UP6 607 aa16.27■□□□□ 0.19
SCARB1-202ENST00000339570 STYXQ8WUJ0 223 aa16.27■□□□□ 0.19
SCARB1-202ENST00000339570 TMEM40Q8WWA1 233 aa16.27■□□□□ 0.19
SCARB1-202ENST00000339570 IL22Q9GZX6 179 aa16.27■□□□□ 0.19
SCARB1-202ENST00000339570 PAIP1Q9H074 479 aaKnown RBP16.27■□□□□ 0.19
SCARB1-202ENST00000339570 EIF2B3Q9NR50 452 aaKnown RBP16.27■□□□□ 0.19
SCARB1-202ENST00000339570 RLFQ13129 1914 aa16.26■□□□□ 0.19
SCARB1-202ENST00000339570 SRP72O76094 671 aaKnown RBP16.26■□□□□ 0.19
SCARB1-202ENST00000339570 ACADSBP45954 432 aa16.26■□□□□ 0.19
SCARB1-202ENST00000339570 ECT2LQ008S8 904 aa16.26■□□□□ 0.19
SCARB1-202ENST00000339570 OTUD3Q5T2D3 398 aaPredicted RBP16.26■□□□□ 0.19
SCARB1-202ENST00000339570 CHSY3Q70JA7 882 aa16.26■□□□□ 0.19
SCARB1-202ENST00000339570 CYS1Q717R9 158 aa16.26■□□□□ 0.19
SCARB1-202ENST00000339570 TFAP2DQ7Z6R9 452 aa16.26■□□□□ 0.19
SCARB1-202ENST00000339570 HMGCLL1Q8TB92 370 aa16.26■□□□□ 0.19
SCARB1-202ENST00000339570 DNAJB14Q8TBM8 379 aa16.26■□□□□ 0.19
SCARB1-202ENST00000339570 SLCO4A1Q96BD0 722 aa16.26■□□□□ 0.19
SCARB1-202ENST00000339570 NPY6RQ99463 290 aa16.26■□□□□ 0.19
SCARB1-202ENST00000339570 MRPL46Q9H2W6 279 aaKnown RBP16.26■□□□□ 0.19
SCARB1-202ENST00000339570 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.26■□□□□ 0.19
SCARB1-202ENST00000339570 LCTP09848 1927 aa16.26■□□□□ 0.19
SCARB1-202ENST00000339570 ATP6V1G1O75348 118 aa16.26■□□□□ 0.19
SCARB1-202ENST00000339570 CNMDO75829 334 aa16.26■□□□□ 0.19
SCARB1-202ENST00000339570 FYNP06241 537 aa16.26■□□□□ 0.19
SCARB1-202ENST00000339570 SLC5A3P53794 718 aa16.26■□□□□ 0.19
SCARB1-202ENST00000339570 CSE1LP55060 971 aaKnown RBP16.26■□□□□ 0.19
SCARB1-202ENST00000339570 RPS6KA2Q15349 733 aa16.26■□□□□ 0.19
SCARB1-202ENST00000339570 KIAA0319Q5VV43 1072 aa16.26■□□□□ 0.19
SCARB1-202ENST00000339570 HMBOX1Q6NT76 420 aa16.26■□□□□ 0.19
SCARB1-202ENST00000339570 ZNF419Q96HQ0 510 aaPredicted RBP16.26■□□□□ 0.19
SCARB1-202ENST00000339570 DUSP16Q9BY84 665 aa16.26■□□□□ 0.19
SCARB1-202ENST00000339570 NAA50Q9GZZ1 169 aaKnown RBP16.26■□□□□ 0.19
SCARB1-202ENST00000339570 CHCHD3Q9NX63 227 aaKnown RBP16.26■□□□□ 0.19
SCARB1-202ENST00000339570 XPOTO43592 962 aaKnown RBP16.25■□□□□ 0.19
SCARB1-202ENST00000339570 H6PDO95479 791 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 ATP6V1B2P21281 511 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 APLP1P51693 650 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 CCNA1P78396 465 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 NAB1Q13506 487 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 GPR158Q5T848 1215 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 NAPEPLDQ6IQ20 393 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 FASTKD5Q7L8L6 764 aaKnown RBP16.25■□□□□ 0.19
SCARB1-202ENST00000339570 DHFR2Q86XF0 187 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 ARRDC4Q8NCT1 418 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 SPPL2BQ8TCT7 592 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 TNIP3Q96KP6 325 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 C3orf30Q96M34 536 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 OLFM1Q99784 485 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 ZNF696Q9H7X3 374 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 EVLQ9UI08 416 aaPredicted RBP16.25■□□□□ 0.19
SCARB1-202ENST00000339570 CROTQ9UKG9 612 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 POLR2AP24928 1970 aaKnown RBP16.25■□□□□ 0.19
SCARB1-202ENST00000339570 HTRA2O43464 458 aaPredicted RBP16.25■□□□□ 0.19
SCARB1-202ENST00000339570 TSPAN3O60637 253 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms