RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 SLC22A17Q8WUG5 538 aa17.32■□□□□ 0.36
ATAD3A-201ENST00000339113 NAF1Q96HR8 494 aaKnown RBP17.32■□□□□ 0.36
ATAD3A-201ENST00000339113 RAD9AQ99638 391 aa17.32■□□□□ 0.36
ATAD3A-201ENST00000339113 MANSC1Q9H8J5 431 aa17.32■□□□□ 0.36
ATAD3A-201ENST00000339113 CHKBQ9Y259 395 aa17.32■□□□□ 0.36
ATAD3A-201ENST00000339113 TBC1D30Q9Y2I9 924 aa17.32■□□□□ 0.36
ATAD3A-201ENST00000339113 PLXNA4Q9HCM2 1894 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 ILVBLA1L0T0 632 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 A6NHS1 94 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 KDELR3O43731 214 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 LRG1P02750 347 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 GABRB3P28472 473 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 RGRP47804 291 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 ZNF235Q14590 738 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 C16orf46Q6P387 395 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 CHST9Q7L1S5 443 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 CCDC117Q8IWD4 279 aaPredicted RBP17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 ENDOVQ8N8Q3 282 aaKnown RBP17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 POLR1EQ9GZS1 481 aaKnown RBP17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 TREX1Q9NSU2 369 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 SSX2IPQ9Y2D8 614 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 MYLKQ15746 1914 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 ATXN1LP0C7T5 689 aaKnown RBP17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 BGNP21810 368 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 SERPINH1P50454 418 aaKnown RBP17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 LIMK2P53671 638 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 SATB1Q01826 763 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 SIRPB2Q5JXA9 342 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 WASHC2DQ5SRD0 308 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 RNF219Q5W0B1 726 aaPredicted RBP17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 PDPK2PQ6A1A2 396 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 OTOAQ7RTW8 1153 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 DENND6AQ8IWF6 608 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 BHMTQ93088 406 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 ERP27Q96DN0 273 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 ZNF599Q96NL3 588 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 ACE2Q9BYF1 805 aaPredicted RBP17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 RETREG1Q9H6L5 497 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 CAB39LQ9H9S4 337 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 ASB3Q9Y575 518 aa17.31■□□□□ 0.36
ATAD3A-201ENST00000339113 CHD5Q8TDI0 1954 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 LOC285095A0A1B0GVY8 99 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 A0A1W2PRU2 124 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 TLL1O43897 1013 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 TBL1XO60907 577 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 SPRP35270 261 aaPredicted RBP17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 BMPR1AP36894 532 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 PGGT1BP53609 377 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 OXCT1P55809 520 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 IRX4P78413 519 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 DLG2Q15700 870 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 PLPP4Q5VZY2 271 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 Q6ZNB5 142 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 SP7Q8TDD2 431 aaPredicted RBP17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 SNX15Q9NRS6 342 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 STK39Q9UEW8 545 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 EMCNQ9ULC0 261 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 CBX4O00257 560 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 GFRA2O00451 464 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 CCL16O15467 120 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 HNRNPCL1O60812 293 aaKnown RBP17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 AHSGP02765 367 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 ADH1AP07327 375 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 CALRP27797 417 aaKnown RBP17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 TYK2P29597 1187 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 CTNNB1P35222 781 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 CTBP1Q13363 440 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 CES4AQ5XG92 561 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 SETD3Q86TU7 594 aaPredicted RBP17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 RNF135Q8IUD6 432 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 C7orf61Q8IZ16 206 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 WFDC5Q8TCV5 224 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 ZNF398Q8TD17 642 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 ACMSDQ8TDX5 336 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 EXOC2Q96KP1 924 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 MRM3Q9HC36 420 aaKnown RBP17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 ZNF358Q9NW07 568 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 HCFC1R1Q9NWW0 138 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 UBA2Q9UBT2 640 aaPredicted RBP17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 SLC4A7Q9Y6M7 1214 aa17.3■□□□□ 0.36
ATAD3A-201ENST00000339113 C2orf71A6NGG8 1288 aa17.29■□□□□ 0.36
ATAD3A-201ENST00000339113 PEX11AO75192 247 aa17.29■□□□□ 0.36
ATAD3A-201ENST00000339113 ARHGEF15O94989 841 aa17.29■□□□□ 0.36
ATAD3A-201ENST00000339113 CD160O95971 181 aa17.29■□□□□ 0.36
ATAD3A-201ENST00000339113 GSRP00390 522 aa17.29■□□□□ 0.36
ATAD3A-201ENST00000339113 C1RP00736 705 aa17.29■□□□□ 0.36
ATAD3A-201ENST00000339113 PRKCGP05129 697 aa17.29■□□□□ 0.36
ATAD3A-201ENST00000339113 MZF1P28698 734 aaPredicted RBP17.29■□□□□ 0.36
ATAD3A-201ENST00000339113 CYTH1Q15438 398 aa17.29■□□□□ 0.36
ATAD3A-201ENST00000339113 TAF11Q15544 211 aa17.29■□□□□ 0.36
ATAD3A-201ENST00000339113 CARNMT1Q8N4J0 409 aa17.29■□□□□ 0.36
ATAD3A-201ENST00000339113 PNPLA1Q8N8W4 532 aa17.29■□□□□ 0.36
ATAD3A-201ENST00000339113 MRPL43Q8N983 215 aaKnown RBP17.29■□□□□ 0.36
ATAD3A-201ENST00000339113 PTCD2Q8WV60 388 aaKnown RBP17.29■□□□□ 0.36
ATAD3A-201ENST00000339113 MRPS31Q92665 395 aaKnown RBP17.29■□□□□ 0.36
ATAD3A-201ENST00000339113 SLC7A6OSQ96CW6 309 aaPredicted RBP17.29■□□□□ 0.36
ATAD3A-201ENST00000339113 CORO1BQ9BR76 489 aa17.29■□□□□ 0.36
ATAD3A-201ENST00000339113 MUC3BQ9H195 1237 aa17.29■□□□□ 0.36
ATAD3A-201ENST00000339113 TLE6Q9H808 572 aa17.29■□□□□ 0.36
ATAD3A-201ENST00000339113 KCTD3Q9Y597 815 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms