RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 PIGNO95427 931 aa15.45■□□□□ 0.06
PRKN-201ENST00000338468 CER1O95813 267 aa15.45■□□□□ 0.06
PRKN-201ENST00000338468 ZNF883P0CG24 379 aa15.45■□□□□ 0.06
PRKN-201ENST00000338468 GJC1P36383 396 aa15.45■□□□□ 0.06
PRKN-201ENST00000338468 NUDT1P36639 197 aa15.45■□□□□ 0.06
PRKN-201ENST00000338468 SETMARQ53H47 684 aaPredicted RBP15.45■□□□□ 0.06
PRKN-201ENST00000338468 FBXL19Q6PCT2 694 aa15.45■□□□□ 0.06
PRKN-201ENST00000338468 DBX2Q6ZNG2 339 aa15.45■□□□□ 0.06
PRKN-201ENST00000338468 ADAT2Q7Z6V5 191 aaKnown RBP15.45■□□□□ 0.06
PRKN-201ENST00000338468 RHOT2Q8IXI1 618 aa15.45■□□□□ 0.06
PRKN-201ENST00000338468 FAF2Q96CS3 445 aa15.45■□□□□ 0.06
PRKN-201ENST00000338468 SP110Q9HB58 689 aa15.45■□□□□ 0.06
PRKN-201ENST00000338468 LCMT1Q9UIC8 334 aa15.45■□□□□ 0.06
PRKN-201ENST00000338468 NBEAQ8NFP9 2946 aa15.45■□□□□ 0.06
PRKN-201ENST00000338468 ITPR1Q14643 2758 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 SPAARA0A1B0GVQ0 90 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 TSPAN11A1L157 253 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 PRAMEF26H0Y7S4 382 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 TLR4O00206 839 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 SLC31A1O15431 190 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 MFSD11O43934 449 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 PALMO75781 387 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 TRIM16O95361 564 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 TIMP2P16035 220 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 ITIH2P19823 946 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 ARHGAP25P42331 645 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 CSNK1DP48730 415 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 NXPH1P58417 271 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 FAM193AP78312 1265 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 RAD51Q06609 339 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 SLC10A7Q0GE19 358 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 RFTN1Q14699 578 aaPredicted RBP15.44■□□□□ 0.06
PRKN-201ENST00000338468 SHBQ15464 509 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 ANKRD20A8PQ5CZ79 823 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 LRRC73Q5JTD7 316 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 PRAMEF14Q5SWL7 426 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 NCBP2-AS2Q69YL0 99 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 SPATS2Q86XZ4 545 aaKnown RBP15.44■□□□□ 0.06
PRKN-201ENST00000338468 PGBD5Q8N414 524 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 PQLC3Q8N755 202 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 MFSD2AQ8NA29 543 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 KCTD6Q8NC69 237 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 RAPGEF5Q92565 580 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 RAB7BQ96AH8 199 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 PANX2Q96RD6 677 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 MYOCQ99972 504 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 ZNF670Q9BS34 389 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 FZD3Q9NPG1 666 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 TM7SF3Q9NS93 570 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 DKK3Q9UBP4 350 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 TFR2Q9UP52 801 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 PCNX2A6NKB5 2137 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 CABIN1Q9Y6J0 2220 aa15.44■□□□□ 0.06
PRKN-201ENST00000338468 C3orf70A6NLC5 250 aaPredicted RBP15.43■□□□□ 0.06
PRKN-201ENST00000338468 RAD51BO15315 384 aa15.43■□□□□ 0.06
PRKN-201ENST00000338468 CBFA2T3O75081 653 aa15.43■□□□□ 0.06
PRKN-201ENST00000338468 KRT7P08729 469 aa15.43■□□□□ 0.06
PRKN-201ENST00000338468 MAGEA1P43355 309 aa15.43■□□□□ 0.06
PRKN-201ENST00000338468 C21orf59P57076 290 aa15.43■□□□□ 0.06
PRKN-201ENST00000338468 NSUN2Q08J23 767 aaKnown RBP eCLIP15.43■□□□□ 0.06
PRKN-201ENST00000338468 LBRQ14739 615 aaKnown RBP15.43■□□□□ 0.06
PRKN-201ENST00000338468 PAFAH1B3Q15102 231 aaKnown RBP15.43■□□□□ 0.06
PRKN-201ENST00000338468 PDK2Q15119 407 aa15.43■□□□□ 0.06
PRKN-201ENST00000338468 TMCO4Q5TGY1 634 aa15.43■□□□□ 0.06
PRKN-201ENST00000338468 KIAA1161Q6NSJ0 714 aa15.43■□□□□ 0.06
PRKN-201ENST00000338468 SRLQ86TD4 932 aa15.43■□□□□ 0.06
PRKN-201ENST00000338468 IQCHQ86VS3 1027 aa15.43■□□□□ 0.06
PRKN-201ENST00000338468 ZSWIM9Q86XI8 627 aa15.43■□□□□ 0.06
PRKN-201ENST00000338468 CAMK1DQ8IU85 385 aa15.43■□□□□ 0.06
PRKN-201ENST00000338468 NAXDQ8IW45 347 aa15.43■□□□□ 0.06
PRKN-201ENST00000338468 CCDC170Q8IYT3 715 aa15.43■□□□□ 0.06
PRKN-201ENST00000338468 ZNF599Q96NL3 588 aa15.43■□□□□ 0.06
PRKN-201ENST00000338468 PSKH2Q96QS6 385 aa15.43■□□□□ 0.06
PRKN-201ENST00000338468 CINPQ9BW66 212 aaPredicted RBP15.43■□□□□ 0.06
PRKN-201ENST00000338468 CALN1Q9BXU9 219 aa15.43■□□□□ 0.06
PRKN-201ENST00000338468 SUV39H2Q9H5I1 410 aa15.43■□□□□ 0.06
PRKN-201ENST00000338468 HYOU1Q9Y4L1 999 aa15.43■□□□□ 0.06
PRKN-201ENST00000338468 PCDHGB2Q9Y5G2 931 aa15.43■□□□□ 0.06
PRKN-201ENST00000338468 TRPM6Q9BX84 2022 aa15.43■□□□□ 0.06
PRKN-201ENST00000338468 A0A1B0GTQ1 180 aa15.42■□□□□ 0.06
PRKN-201ENST00000338468 TTC24A2A3L6 582 aaPredicted RBP15.42■□□□□ 0.06
PRKN-201ENST00000338468 IGLON5A6NGN9 336 aa15.42■□□□□ 0.06
PRKN-201ENST00000338468 SOWAHDA6NJG2 315 aa15.42■□□□□ 0.06
PRKN-201ENST00000338468 TSPAN6O43657 245 aa15.42■□□□□ 0.06
PRKN-201ENST00000338468 CR2P20023 1033 aa15.42■□□□□ 0.06
PRKN-201ENST00000338468 KDELR1P24390 212 aa15.42■□□□□ 0.06
PRKN-201ENST00000338468 SERPINB6P35237 376 aa15.42■□□□□ 0.06
PRKN-201ENST00000338468 HADHBP55084 474 aaKnown RBP15.42■□□□□ 0.06
PRKN-201ENST00000338468 RPS21P63220 83 aaKnown RBP15.42■□□□□ 0.06
PRKN-201ENST00000338468 IL9RQ01113 521 aa15.42■□□□□ 0.06
PRKN-201ENST00000338468 GCNT7Q6ZNI0 430 aa15.42■□□□□ 0.06
PRKN-201ENST00000338468 TTC7BQ86TV6 843 aa15.42■□□□□ 0.06
PRKN-201ENST00000338468 ATPAF2Q8N5M1 289 aa15.42■□□□□ 0.06
PRKN-201ENST00000338468 HCAR2Q8TDS4 363 aa15.42■□□□□ 0.06
PRKN-201ENST00000338468 FEM1CQ96JP0 617 aa15.42■□□□□ 0.06
PRKN-201ENST00000338468 BMFQ96LC9 184 aa15.42■□□□□ 0.06
PRKN-201ENST00000338468 ELF4Q99607 663 aaPredicted RBP15.42■□□□□ 0.06
PRKN-201ENST00000338468 KLF6Q99612 283 aaPredicted RBP15.42■□□□□ 0.06
PRKN-201ENST00000338468 C1QTNF2Q9BXJ5 285 aa15.42■□□□□ 0.06
PRKN-201ENST00000338468 SLC17A9Q9BYT1 436 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms