RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 CRYMQ14894 314 aa14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 CCDC85BQ15834 202 aaPredicted RBP14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 KLHL38Q2WGJ6 581 aa14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 KBTBD12Q3ZCT8 623 aa14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 ACCSLQ4AC99 568 aa14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 PCID2Q5JVF3 399 aa14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 TRMT10BQ6PF06 316 aaKnown RBP14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SH2D3CQ8N5H7 860 aa14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 OR6K2Q8NGY2 324 aa14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SUSD6Q92537 303 aa14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 TTC17Q96AE7 1141 aa14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 ZNF669Q96BR6 464 aaPredicted RBP14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 CYTH2Q99418 400 aa14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 GTSE1Q9NYZ3 720 aa14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 CTNNAL1Q9UBT7 734 aa14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SLCO3A1Q9UIG8 710 aa14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SOX13Q9UN79 622 aa14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 CHKBQ9Y259 395 aa14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 CCDC78A2IDD5 438 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ECI2O75521 394 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 EPOP01588 193 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 GDI1P31150 447 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 NR1H3Q13133 447 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 TMEM135Q86UB9 458 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 UNC5BQ8IZJ1 945 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 CPA6Q8N4T0 437 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 CYB5D2Q8WUJ1 264 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 SORCS1Q8WY21 1168 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 MFSD3Q96ES6 412 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ATP6V1G3Q96LB4 118 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 FCRL3Q96P31 734 aaPredicted RBP14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 TRIB3Q96RU7 358 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 TDRD1Q9BXT4 1180 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 CIPCQ9C0C6 399 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 TBK1Q9UHD2 729 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 EVLQ9UI08 416 aaPredicted RBP14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ERVW-1Q9UQF0 538 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 RAI2Q9Y5P3 530 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 COL4A3Q01955 1670 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 SPTBN5Q9NRC6 3674 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 FAM237BA0A1B0GVD1 139 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 RGS16O15492 202 aaPredicted RBP14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 USP1O94782 785 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 NDST3O95803 873 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 C1QAP02745 245 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 HLA-DPA1P20036 260 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 NMBRP28336 390 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 MESP2Q0VG99 397 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 TRAF2Q12933 501 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 DLG2Q15700 870 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ANKRD20A4Q4UJ75 823 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 RALGPS1Q5JS13 557 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 SPANXN3Q5MJ09 141 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 AGBL2Q5U5Z8 902 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 C22orf39Q6P5X5 142 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 RYBPQ8N488 228 aaPredicted RBP14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PPHLN1Q8NEY8 458 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PDCD6IPQ8WUM4 868 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ZNF778Q96MU6 729 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 TRMT61BQ9BVS5 477 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 KIFC1Q9BW19 673 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 SMYD2Q9NRG4 433 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 MOCS1Q9NZB8 636 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 DEC1Q9P2X7 70 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 SLC27A6Q9Y2P4 619 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ARIH1Q9Y4X5 557 aaPredicted RBP14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 EYSQ5T1H1 3165 aa14.89□□□□□ -0.03
CDK5RAP3-201ENST00000338399 KIAA1549LQ6ZVL6 1849 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 GRXCR2A6NFK2 248 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 CXorf49A8MYA2 514 aaPredicted RBP14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 BNIP3LO60238 219 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 CDH16O75309 829 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ALDH1A2O94788 518 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 IGSF6O95976 241 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PRLP01236 227 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 FGF1P05230 155 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PDHA1P08559 390 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PRKCHP24723 683 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ADRA1DP25100 572 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 CSNK1DP48730 415 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 AP1S1P61966 158 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 SNRPD1P62314 119 aaKnown RBP14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 KDSRQ06136 332 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 MSLNQ13421 630 aaPredicted RBP14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 SEPT6Q14141 434 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 GRAMD4Q6IC98 578 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PKN3Q6P5Z2 889 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 MTSS1LQ765P7 747 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 CTAGE3PQ8IX95 158 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 OR2AP1Q8NGE2 309 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 WFIKKN2Q8TEU8 576 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ISG20Q96AZ6 181 aaKnown RBP14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PGM2Q96G03 612 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PAFAH2Q99487 392 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PPANQ9NQ55 473 aaKnown RBP14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 IL1RAPL1Q9NZN1 696 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 VPS18Q9P253 973 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 EPS15L1Q9UBC2 864 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 SLC24A2Q9UI40 661 aa14.88□□□□□ -0.03
CDK5RAP3-201ENST00000338399 NOVA2Q9UNW9 492 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms