RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 DUSP16Q9BY84 665 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 ASB8Q9H765 288 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 ATAD3AQ9NVI7 634 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 IFRD1O00458 451 aaPredicted RBP13.86□□□□□ -0.19
RTN4-202ENST00000337526 CENPAP49450 140 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 CLK2P49760 499 aaKnown RBP13.86□□□□□ -0.19
RTN4-202ENST00000337526 PCBP1Q15365 356 aaKnown RBP eCLIP13.86□□□□□ -0.196e-8■■□□□ 14.5
RTN4-202ENST00000337526 ANKRD22Q5VYY1 191 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 TMC5Q6UXY8 1006 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 GPC2Q8N158 579 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 WDR60Q8WVS4 1066 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 KRCC1Q9NPI7 259 aaPredicted RBP13.86□□□□□ -0.19
RTN4-202ENST00000337526 ADAMTSL3P82987 1691 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 H3BMM5 538 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 VCLP18206 1134 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 TTPAP49638 278 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 XIAPP98170 497 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 INO80DQ53TQ3 878 aaPredicted RBP13.86□□□□□ -0.19
RTN4-202ENST00000337526 ZNF618Q5T7W0 954 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 GCNT7Q6ZNI0 430 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 ARHGAP36Q6ZRI8 547 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 OR7A2PQ8NGA2 310 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 TCF12Q99081 682 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 RTKNQ9BST9 563 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 ZFP14Q9HCL3 533 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 PNPLA3Q9NST1 481 aa13.86□□□□□ -0.19
RTN4-202ENST00000337526 EME2A4GXA9 379 aaPredicted RBP13.85□□□□□ -0.19
RTN4-202ENST00000337526 FFAR3O14843 346 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 GPR42O15529 346 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 FARP2O94887 1054 aaPredicted RBP13.85□□□□□ -0.19
RTN4-202ENST00000337526 MFN2O95140 757 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 TPSB2P20231 275 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 RXRGP48443 463 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 BNIP2Q12982 314 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 TPSAB1Q15661 275 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 DGKKQ5KSL6 1271 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 BROXQ5VW32 411 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 MRPS26Q9BYN8 205 aaKnown RBP13.85□□□□□ -0.19
RTN4-202ENST00000337526 TRAF6Q9Y4K3 522 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 RIPK3Q9Y572 518 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 MYPNQ86TC9 1320 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 CAPN8A6NHC0 703 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 CILPO75339 1184 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 COX7A2P14406 83 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 GRIK3Q13003 919 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 PDZK1Q5T2W1 519 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 NPAS2Q99743 824 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 TRMOQ9BU70 441 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 NOL6Q9H6R4 1146 aaKnown RBP13.85□□□□□ -0.19
RTN4-202ENST00000337526 ABLIM1O14639 778 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 ASNA1O43681 348 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 NRP2O60462 931 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 MTA2O94776 668 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 ADSSP30520 456 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 ATN1P54259 1190 aaPredicted RBP13.85□□□□□ -0.19
RTN4-202ENST00000337526 TEX44Q53QW1 395 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 CXCL17Q6UXB2 119 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 SLC4A11Q8NBS3 891 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 DGCR14Q96DF8 476 aaKnown RBP13.85□□□□□ -0.19
RTN4-202ENST00000337526 FCRL2Q96LA5 508 aaPredicted RBP13.85□□□□□ -0.19
RTN4-202ENST00000337526 YME1L1Q96TA2 773 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 C2orf49Q9BVC5 232 aaPredicted RBP13.85□□□□□ -0.19
RTN4-202ENST00000337526 NUAK2Q9H093 628 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 S100A14Q9HCY8 104 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 SIX2Q9NPC8 291 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 PTCH2Q9Y6C5 1203 aa13.85□□□□□ -0.19
RTN4-202ENST00000337526 HOXC6P09630 235 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 CHRNB2P17787 502 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 ZNF572Q7Z3I7 529 aaPredicted RBP13.84□□□□□ -0.19
RTN4-202ENST00000337526 PIGWQ7Z7B1 504 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 NACC2Q96BF6 587 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 PPP3R2Q96LZ3 170 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 LOC100506127A0A0U1RQW1 187 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 PIPSLA2A3N6 862 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 MGRN1O60291 552 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 CATP04040 527 aaKnown RBP13.84□□□□□ -0.19
RTN4-202ENST00000337526 MPSTP25325 297 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 SERPINA4P29622 427 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 ABL2P42684 1182 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 CAPZA2P47755 286 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 METTL21CQ5VZV1 264 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 DEFB128Q7Z7B8 93 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 TDRPQ86YL5 185 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 CYP4Z2PQ8N1L4 340 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 AADATQ8N5Z0 425 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 STARD8Q92502 1023 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 MYLPFQ96A32 169 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 ZCCHC2Q9C0B9 1178 aaKnown RBP13.84□□□□□ -0.19
RTN4-202ENST00000337526 UXTQ9UBK9 157 aaPredicted RBP13.84□□□□□ -0.19
RTN4-202ENST00000337526 ZMYND8Q9ULU4 1186 aaPredicted RBP13.84□□□□□ -0.19
RTN4-202ENST00000337526 FAM25AB3EWG3 89 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 FAM25CB3EWG5 89 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 FAM25GB3EWG6 89 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 ADAMTS3O15072 1205 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 CD48P09326 243 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 NELFEP18615 380 aaKnown RBP13.84□□□□□ -0.19
RTN4-202ENST00000337526 CDK18Q07002 472 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 PHKG1Q16816 387 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 GPRIN3Q6ZVF9 776 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 NKX2-3Q8TAU0 364 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms