RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 PEX11BO96011 259 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 MMP2P08253 660 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 CCDC166P0CW27 439 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 STMN1P16949 149 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 ATF6P18850 670 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 KCNC1P48547 511 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 CDKN1CP49918 316 aaPredicted RBP8.93□□□□□ -0.98
SNCA-201ENST00000336904 SLC12A2P55011 1212 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 CDKN2DP55273 166 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 INHBEP58166 350 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 COG7P83436 770 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 POLD3Q15054 466 aaPredicted RBP8.93□□□□□ -0.98
SNCA-201ENST00000336904 MAPRE1Q15691 268 aaKnown RBP8.93□□□□□ -0.98
SNCA-201ENST00000336904 LSM12Q3MHD2 195 aaKnown RBP8.93□□□□□ -0.98
SNCA-201ENST00000336904 SIRPB2Q5JXA9 342 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 SH2D4BQ5SQS7 431 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 GPR158Q5T848 1215 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 LRRC8DQ7L1W4 858 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 CLEC14AQ86T13 490 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 MON1AQ86VX9 555 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 SNX32Q86XE0 403 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 DCBLD1Q8N8Z6 715 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 ZNF512Q96ME7 567 aaPredicted RBP8.93□□□□□ -0.98
SNCA-201ENST00000336904 TSNARE1Q96NA8 513 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 TSPAN18Q96SJ8 248 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 ZYG11BQ9C0D3 744 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 ALG9Q9H6U8 611 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 TLE6Q9H808 572 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 LRFN2Q9ULH4 789 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 GREB1Q4ZG55 1949 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 A0A088AWK7 358 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 A8MX80 341 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 MTSS1O43312 755 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 ANXA9O76027 345 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 ADRA1AP35348 466 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 CPOXP36551 454 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 TM4SF4P48230 202 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 NUDT2P50583 147 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 RAB10P61026 200 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 SEMA3AQ14563 771 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 KRT72Q14CN4 511 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 BRMS1LQ5PSV4 323 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 LAYNQ6UX15 382 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 RANBP10Q6VN20 620 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 OR13J1Q8NGT2 312 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 SCG3Q8WXD2 468 aaKnown RBP8.93□□□□□ -0.98
SNCA-201ENST00000336904 ESAMQ96AP7 390 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 NAF1Q96HR8 494 aaKnown RBP8.93□□□□□ -0.98
SNCA-201ENST00000336904 TCF7L2Q9NQB0 619 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 OXSMQ9NWU1 459 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 RRN3Q9NYV6 651 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 PCDHB7Q9Y5E2 793 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 PCDHB12Q9Y5F1 795 aa8.93□□□□□ -0.98
SNCA-201ENST00000336904 UBA6A0AVT1 1052 aaPredicted RBP8.92□□□□□ -0.98
SNCA-201ENST00000336904 NCF1BA6NI72 391 aaPredicted RBP8.92□□□□□ -0.98
SNCA-201ENST00000336904 NCF1CA8MVU1 366 aaPredicted RBP8.92□□□□□ -0.98
SNCA-201ENST00000336904 ENPP3O14638 875 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 RAMP2O60895 175 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 SIX3O95343 332 aaPredicted RBP8.92□□□□□ -0.98
SNCA-201ENST00000336904 ENO3P13929 434 aaPredicted RBP8.92□□□□□ -0.98
SNCA-201ENST00000336904 NCF1P14598 390 aaPredicted RBP8.92□□□□□ -0.98
SNCA-201ENST00000336904 OR1D2P34982 312 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 SCNN1BP51168 640 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 COPAP53621 1224 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 GEMP55040 296 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 PRAMEP78395 509 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 LPCAT4Q643R3 524 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 FUT10Q6P4F1 479 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 KDELC1Q6UW63 502 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 TMEM207Q6UWW9 146 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.92□□□□□ -0.98
SNCA-201ENST00000336904 LINC00523Q86TU6 105 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 TMPRSS6Q8IU80 811 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 DCP1BQ8IZD4 617 aaKnown RBP8.92□□□□□ -0.98
SNCA-201ENST00000336904 LSMEM2Q8N112 164 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 MAGEC3Q8TD91 643 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 VAT1Q99536 393 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 ZBED2Q9BTP6 218 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.92□□□□□ -0.98
SNCA-201ENST00000336904 SRRDQ9UH36 339 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 FAM50BQ9Y247 325 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 TLR6Q9Y2C9 796 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 REV3LO60673 3130 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 MAP3K13O43283 966 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 ITGAXP20702 1163 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 MAGEA12P43365 314 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 CD151P48509 253 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 SERPINH1P50454 418 aaKnown RBP8.92□□□□□ -0.98
SNCA-201ENST00000336904 CCDC153Q494R4 210 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 LRRC74BQ6ZQY2 392 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 CYS1Q717R9 158 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 EFHBQ8N7U6 833 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 SLC39A13Q96H72 371 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 CAPNS2Q96L46 248 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 NPAS2Q99743 824 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 TRIM8Q9BZR9 551 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 CXorf56Q9H5V9 222 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 GPAMQ9HCL2 828 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 TLR9Q9NR96 1032 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 PLK2Q9NYY3 685 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms