RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 ADCY6O43306 1168 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 URODP06132 367 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 C2P06681 752 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 HIST1H2AGP0C0S8 130 aaPredicted RBP6.54□□□□□ -1.36
HMG20A-201ENST00000336216 CTPS1P17812 591 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 HIST1H2ADP20671 130 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 MAP4P27816 1152 aaKnown RBP6.54□□□□□ -1.36
HMG20A-201ENST00000336216 SLC5A3P53794 718 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 HTRA3P83110 453 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 BFSP2Q13515 415 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 ARHGEF7Q14155 803 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 SKIV2LQ15477 1246 aaKnown RBP6.54□□□□□ -1.36
HMG20A-201ENST00000336216 NEDD8Q15843 81 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 PPM1LQ5SGD2 360 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 TMEM198Q66K66 360 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 C16orf89Q6UX73 402 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 ZBTB49Q6ZSB9 765 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 FRMD7Q6ZUT3 714 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 MILR1Q7Z6M3 343 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 TP53INP2Q8IXH6 220 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 ZNF567Q8N184 647 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 NAT8LQ8N9F0 302 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 TSPAN14Q8NG11 270 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 DQX1Q8TE96 717 aaKnown RBP6.54□□□□□ -1.36
HMG20A-201ENST00000336216 TMEM40Q8WWA1 233 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 HIST1H2AHQ96KK5 128 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 SERPINB11Q96P15 392 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 HIST1H2AJQ99878 128 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 H2AFJQ9BTM1 129 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 THUMPD3Q9BV44 507 aaKnown RBP6.54□□□□□ -1.36
HMG20A-201ENST00000336216 BRD8Q9H0E9 1235 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 ING2Q9H160 280 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 FBXO44Q9H4M3 255 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 KCNK13Q9HB14 408 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 EML4Q9HC35 981 aaKnown RBP6.54□□□□□ -1.36
HMG20A-201ENST00000336216 SCUBE2Q9NQ36 999 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 ABCC13Q9NSE7 274 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 RRN3Q9NYV6 651 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 TRMT6Q9UJA5 497 aaKnown RBP6.54□□□□□ -1.36
HMG20A-201ENST00000336216 TSC22D4Q9Y3Q8 395 aa6.54□□□□□ -1.36
HMG20A-201ENST00000336216 FAM95CA0A1B0GW59 222 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 NR5A2O00482 541 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 AXIN1O15169 862 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 AOC2O75106 756 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 TRMUO75648 421 aaKnown RBP6.53□□□□□ -1.36
HMG20A-201ENST00000336216 ALDH1A1P00352 501 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 THRAP10827 490 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 PPP3CCP48454 512 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 WNT3AP56704 352 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 NAA20P61599 178 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 LRRC74AQ0VAA2 488 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 TUSC3Q13454 348 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 TBCCQ15814 346 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 CTC1Q2NKJ3 1217 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 TBC1D25Q3MII6 688 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 SH3D19Q5HYK7 790 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 C4orf22Q6V702 233 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 OTOP2Q7RTS6 562 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 C11orf96Q7Z7L8 435 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 GIPC3Q8TF64 312 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 TSPAN17Q96FV3 270 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 PEBP4Q96S96 227 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 ACOX2Q99424 681 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 NPAS2Q99743 824 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 TBL1YQ9BQ87 522 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 COG4Q9H9E3 785 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 SEMA4BQ9NPR2 832 aaPredicted RBP6.53□□□□□ -1.36
HMG20A-201ENST00000336216 TBC1D23Q9NUY8 699 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 GMIPQ9P107 970 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.53□□□□□ -1.36
HMG20A-201ENST00000336216 CDH9Q9ULB4 789 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 TMCO1Q9UM00 188 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 PCDHGC3Q9UN70 934 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 AGRPO00253 132 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 NCAM2O15394 837 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 BEST1O76090 585 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 DDHD2O94830 711 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 TGDSO95455 350 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 HDCP19113 662 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 ATP5C1P36542 298 aaKnown RBP6.53□□□□□ -1.36
HMG20A-201ENST00000336216 SOX4Q06945 474 aaPredicted RBP6.53□□□□□ -1.36
HMG20A-201ENST00000336216 TRIM32Q13049 653 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 GK3PQ14409 553 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 PRSS55Q6UWB4 352 aaPredicted RBP6.53□□□□□ -1.36
HMG20A-201ENST00000336216 GPR141Q7Z602 305 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 RBM23Q86U06 439 aaKnown RBP6.53□□□□□ -1.36
HMG20A-201ENST00000336216 TAC4Q86UU9 113 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 SLC44A2Q8IWA5 706 aaPredicted RBP6.53□□□□□ -1.36
HMG20A-201ENST00000336216 DENND6AQ8IWF6 608 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 SLC35B2Q8TB61 432 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 GRIN3AQ8TCU5 1115 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 MTFMTQ96DP5 389 aaKnown RBP6.53□□□□□ -1.36
HMG20A-201ENST00000336216 ZBED3Q96IU2 234 aaPredicted RBP6.53□□□□□ -1.36
HMG20A-201ENST00000336216 CNDP1Q96KN2 507 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 SNX27Q96L92 541 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 FAM210AQ96ND0 272 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 CIB1Q99828 191 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 TMEM106CQ9BVX2 250 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 ADNPQ9H2P0 1102 aa6.53□□□□□ -1.36
HMG20A-201ENST00000336216 MID1IP1Q9NPA3 183 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms