RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 BFARQ9NZS9 450 aa23.51■■□□□ 1.35
TSEN54-201ENST00000333213 SLCO3A1Q9UIG8 710 aa23.51■■□□□ 1.35
TSEN54-201ENST00000333213 TSHRP16473 764 aa23.5■■□□□ 1.35
TSEN54-201ENST00000333213 NPY2RP49146 381 aa23.5■■□□□ 1.35
TSEN54-201ENST00000333213 CCDC85BQ15834 202 aaPredicted RBP23.5■■□□□ 1.35
TSEN54-201ENST00000333213 AGBL2Q5U5Z8 902 aa23.5■■□□□ 1.35
TSEN54-201ENST00000333213 MBLAC2Q68D91 279 aa23.5■■□□□ 1.35
TSEN54-201ENST00000333213 TRMT10BQ6PF06 316 aaKnown RBP23.5■■□□□ 1.35
TSEN54-201ENST00000333213 NCEH1Q6PIU2 408 aa23.5■■□□□ 1.35
TSEN54-201ENST00000333213 CES3Q6UWW8 571 aa23.5■■□□□ 1.35
TSEN54-201ENST00000333213 Q7L0L9 218 aa23.5■■□□□ 1.35
TSEN54-201ENST00000333213 PACS2Q86VP3 889 aa23.5■■□□□ 1.35
TSEN54-201ENST00000333213 AHI1Q8N157 1196 aa23.5■■□□□ 1.35
TSEN54-201ENST00000333213 SH2D3CQ8N5H7 860 aa23.5■■□□□ 1.35
TSEN54-201ENST00000333213 ZNF778Q96MU6 729 aa23.5■■□□□ 1.35
TSEN54-201ENST00000333213 NECTIN4Q96NY8 510 aa23.5■■□□□ 1.35
TSEN54-201ENST00000333213 FCRL3Q96P31 734 aaPredicted RBP23.5■■□□□ 1.35
TSEN54-201ENST00000333213 CHRAC1Q9NRG0 131 aa23.5■■□□□ 1.35
TSEN54-201ENST00000333213 PCDHGC4Q9Y5F7 938 aa23.5■■□□□ 1.35
TSEN54-201ENST00000333213 MIA3Q5JRA6 1907 aa23.5■■□□□ 1.35
TSEN54-201ENST00000333213 CXorf51AA0A1B0GTR3 108 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 SMIM23A6NLE4 172 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 BMP1P13497 986 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 GEMIN4P57678 1058 aaKnown RBP23.49■■□□□ 1.35
TSEN54-201ENST00000333213 ECT2LQ008S8 904 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 CDK18Q07002 472 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 RUNX3Q13761 415 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 DMC1Q14565 340 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 SIRPB2Q5JXA9 342 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 UNC5BQ8IZJ1 945 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 OR6K2Q8NGY2 324 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 TTC17Q96AE7 1141 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 IL22Q9GZX6 179 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 TNKS2Q9H2K2 1166 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 NUMBLQ9Y6R0 609 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 MYLKQ15746 1914 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 ARNTLO00327 626 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 ECI2O75521 394 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 PRLP01236 227 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 MYZAPP0CAP1 466 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 STAT4Q14765 748 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 POU6F1Q14863 301 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 KRT71Q3SY84 523 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 STEAP4Q687X5 459 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 KCTD16Q68DU8 428 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 TMEM135Q86UB9 458 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 FEM1CQ96JP0 617 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 MRGPRX3Q96LB0 322 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 TDRD1Q9BXT4 1180 aaKnown RBP23.49■■□□□ 1.35
TSEN54-201ENST00000333213 ACSS3Q9H6R3 686 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 HAUS2Q9NVX0 235 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 EPS15L1Q9UBC2 864 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 CTNNAL1Q9UBT7 734 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 SLC27A6Q9Y2P4 619 aa23.49■■□□□ 1.35
TSEN54-201ENST00000333213 TLDC2A0PJX2 215 aa23.48■■□□□ 1.35
TSEN54-201ENST00000333213 TCEA3O75764 348 aa23.48■■□□□ 1.35
TSEN54-201ENST00000333213 PDHA1P08559 390 aa23.48■■□□□ 1.35
TSEN54-201ENST00000333213 PGAM1P18669 254 aa23.48■■□□□ 1.35
TSEN54-201ENST00000333213 GDI1P31150 447 aa23.48■■□□□ 1.35
TSEN54-201ENST00000333213 SLC14A2Q15849 920 aa23.48■■□□□ 1.35
TSEN54-201ENST00000333213 SFTPA1Q8IWL2 248 aa23.48■■□□□ 1.35
TSEN54-201ENST00000333213 CYB5D2Q8WUJ1 264 aa23.48■■□□□ 1.35
TSEN54-201ENST00000333213 MFSD3Q96ES6 412 aa23.48■■□□□ 1.35
TSEN54-201ENST00000333213 MYO19Q96H55 970 aa23.48■■□□□ 1.35
TSEN54-201ENST00000333213 SMYD2Q9NRG4 433 aa23.48■■□□□ 1.35
TSEN54-201ENST00000333213 CHKBQ9Y259 395 aa23.48■■□□□ 1.35
TSEN54-201ENST00000333213 RASGRF2O14827 1237 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 EPOP01588 193 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 KCNA5P22460 613 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 CES1P23141 567 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 GKP32189 559 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 PHBP35232 272 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 TRAF2Q12933 501 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 GALNT3Q14435 633 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 GSDMBQ8TAX9 411 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 ROPN1BQ9BZX4 212 aaPredicted RBP23.47■■□□□ 1.35
TSEN54-201ENST00000333213 ROPN1Q9HAT0 212 aaPredicted RBP23.47■■□□□ 1.35
TSEN54-201ENST00000333213 EURLQ9NYK6 297 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 MOCS1Q9NZB8 636 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 PRRT4C9JH25 899 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 AP3B1O00203 1094 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 GJA4P35212 333 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 CRYMQ14894 314 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 PTPRNQ16849 979 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 KBTBD12Q3ZCT8 623 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 SUGP1Q8IWZ8 645 aaKnown RBP23.47■■□□□ 1.35
TSEN54-201ENST00000333213 YAF2Q8IY57 180 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 PHTF2Q8N3S3 785 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 NXPE3Q969Y0 559 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 NAT9Q9BTE0 207 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 KIFC1Q9BW19 673 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 IL1RAPL1Q9NZN1 696 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 EVLQ9UI08 416 aaPredicted RBP23.47■■□□□ 1.35
TSEN54-201ENST00000333213 SOX13Q9UN79 622 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 ERVW-1Q9UQF0 538 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 RAI2Q9Y5P3 530 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 RPS6KL1Q9Y6S9 549 aa23.47■■□□□ 1.35
TSEN54-201ENST00000333213 ZCWPW2A0A1B0GU75 182 aa23.46■■□□□ 1.35
TSEN54-201ENST00000333213 EXOC1LA0A1B0GW35 172 aa23.46■■□□□ 1.35
TSEN54-201ENST00000333213 CXorf49A8MYA2 514 aaPredicted RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms