RNA–Protein interactions for RNA: ENST00000333137.11

SMTN-201, Transcript of smoothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMTN, Length 3,295 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-201ENST00000333137 PCBP1Q15365 356 aaKnown RBP eCLIP13.52□□□□□ -0.241e-6■■■■□ 22.1
SMTN-201ENST00000333137 DGUOKQ16854 277 aa13.52□□□□□ -0.24
SMTN-201ENST00000333137 PLEKHG6Q3KR16 790 aa13.52□□□□□ -0.24
SMTN-201ENST00000333137 GPATCH4Q5T3I0 446 aaKnown RBP13.52□□□□□ -0.24
SMTN-201ENST00000333137 CACHD1Q5VU97 1274 aa13.52□□□□□ -0.24
SMTN-201ENST00000333137 C11orf63Q6NUN7 778 aa13.52□□□□□ -0.24
SMTN-201ENST00000333137 ANKS1BQ7Z6G8 1248 aa13.52□□□□□ -0.24
SMTN-201ENST00000333137 LYSMD2Q8IV50 215 aa13.52□□□□□ -0.24
SMTN-201ENST00000333137 KYQ8NBH2 561 aa13.52□□□□□ -0.24
SMTN-201ENST00000333137 AGR3Q8TD06 166 aa13.52□□□□□ -0.24
SMTN-201ENST00000333137 VPS39Q96JC1 886 aa13.52□□□□□ -0.24
SMTN-201ENST00000333137 SOX17Q9H6I2 414 aaPredicted RBP13.52□□□□□ -0.24
SMTN-201ENST00000333137 VRTNQ9H8Y1 702 aa13.52□□□□□ -0.24
SMTN-201ENST00000333137 FBXO28Q9NVF7 368 aa13.52□□□□□ -0.24
SMTN-201ENST00000333137 ADGRE2Q9UHX3 823 aa13.52□□□□□ -0.24
SMTN-201ENST00000333137 WBP11Q9Y2W2 641 aaKnown RBP13.52□□□□□ -0.24
SMTN-201ENST00000333137 TCAF1Q9Y4C2 921 aa13.52□□□□□ -0.24
SMTN-201ENST00000333137 AKAP11Q9UKA4 1901 aa13.52□□□□□ -0.25
SMTN-201ENST00000333137 OR52Z1P0C646 297 aa13.52□□□□□ -0.25
SMTN-201ENST00000333137 NCAM1P13591 858 aa13.52□□□□□ -0.25
SMTN-201ENST00000333137 HMGB2P26583 209 aaKnown RBP13.52□□□□□ -0.25
SMTN-201ENST00000333137 SHMT1P34896 483 aa13.52□□□□□ -0.25
SMTN-201ENST00000333137 ARSEP51690 589 aa13.52□□□□□ -0.25
SMTN-201ENST00000333137 ERVK-8P63133 956 aa13.52□□□□□ -0.25
SMTN-201ENST00000333137 GPC5P78333 572 aa13.52□□□□□ -0.25
SMTN-201ENST00000333137 GRSF1Q12849 480 aaKnown RBP eCLIP13.52□□□□□ -0.25
SMTN-201ENST00000333137 GALNT3Q14435 633 aa13.52□□□□□ -0.25
SMTN-201ENST00000333137 YIF1BQ5BJH7 314 aa13.52□□□□□ -0.25
SMTN-201ENST00000333137 COLEC12Q5KU26 742 aa13.52□□□□□ -0.25
SMTN-201ENST00000333137 STEAP3Q658P3 488 aa13.52□□□□□ -0.25
SMTN-201ENST00000333137 SP8Q8IXZ3 490 aa13.52□□□□□ -0.25
SMTN-201ENST00000333137 TFAP2CQ92754 450 aa13.52□□□□□ -0.25
SMTN-201ENST00000333137 SLC6A17Q9H1V8 727 aa13.52□□□□□ -0.25
SMTN-201ENST00000333137 C2orf40Q9H1Z8 148 aa13.52□□□□□ -0.25
SMTN-201ENST00000333137 IFT80Q9P2H3 777 aaPredicted RBP13.52□□□□□ -0.25
SMTN-201ENST00000333137 CNOT11Q9UKZ1 510 aaKnown RBP13.52□□□□□ -0.25
SMTN-201ENST00000333137 TAF1LQ8IZX4 1826 aa13.52□□□□□ -0.25
SMTN-201ENST00000333137 AP3D1O14617 1153 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 OLFM2O95897 454 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 ZNF3P17036 446 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 RPL9P32969 192 aaKnown RBP13.51□□□□□ -0.25
SMTN-201ENST00000333137 MFAP3P55082 362 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 NME5P56597 212 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 ACTR2P61160 394 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 GPR68Q15743 365 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 CATSPEREQ5SY80 951 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 BBS12Q6ZW61 710 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 DSELQ8IZU8 1212 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 MFSD4AQ8N468 514 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 CCDC90BQ9GZT6 254 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 ING2Q9H160 280 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 GPN2Q9H9Y4 310 aaPredicted RBP13.51□□□□□ -0.25
SMTN-201ENST00000333137 ENTPD7Q9NQZ7 604 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 DPP3Q9NY33 737 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 ASTN2O75129 1339 aaPredicted RBP13.51□□□□□ -0.25
SMTN-201ENST00000333137 CICQ96RK0 1608 aaPredicted RBP13.51□□□□□ -0.25
SMTN-201ENST00000333137 LY75O60449 1722 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 E2F3O00716 465 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 RBP1P09455 135 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 DHRS4L1P0CG22 281 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 MSH3P20585 1137 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 POLR2IP36954 125 aaKnown RBP13.51□□□□□ -0.25
SMTN-201ENST00000333137 UBE3AQ05086 875 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 BST2Q10589 180 aaKnown RBP13.51□□□□□ -0.25
SMTN-201ENST00000333137 CEACAM7Q14002 265 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 NOXA1Q86UR1 476 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 RHPN2Q8IUC4 686 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 ZNF564Q8TBZ8 553 aaPredicted RBP13.51□□□□□ -0.25
SMTN-201ENST00000333137 NXNL1Q96CM4 212 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 LENG8Q96PV6 779 aaPredicted RBP13.51□□□□□ -0.25
SMTN-201ENST00000333137 FUNDC2Q9BWH2 189 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 EVA1BQ9NVM1 165 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 PCDHGC3Q9UN70 934 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 ANKRD36CQ5JPF3 1778 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 E5RI56 91 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 PITPNM1O00562 1244 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 TFECO14948 347 aaPredicted RBP13.51□□□□□ -0.25
SMTN-201ENST00000333137 CLIC2O15247 247 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 HSD17B7P56937 341 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 FUT2Q10981 343 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 RFTN1Q14699 578 aaPredicted RBP13.51□□□□□ -0.25
SMTN-201ENST00000333137 PCGF5Q86SE9 256 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 MAPKAPK5Q8IW41 473 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 CMASQ8NFW8 434 aaPredicted RBP13.51□□□□□ -0.25
SMTN-201ENST00000333137 SLC20A1Q8WUM9 679 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 FAM149B1Q96BN6 582 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 SGK3Q96BR1 496 aa13.51□□□□□ -0.25
SMTN-201ENST00000333137 DUS2Q9NX74 493 aaKnown RBP13.51□□□□□ -0.25
SMTN-201ENST00000333137 FSCN2O14926 492 aa13.5□□□□□ -0.25
SMTN-201ENST00000333137 UPK1BO75841 260 aa13.5□□□□□ -0.25
SMTN-201ENST00000333137 TRIM49P0CI25 452 aa13.5□□□□□ -0.25
SMTN-201ENST00000333137 TRIM49CP0CI26 452 aa13.5□□□□□ -0.25
SMTN-201ENST00000333137 KCNA5P22460 613 aa13.5□□□□□ -0.25
SMTN-201ENST00000333137 PPP5CP53041 499 aa13.5□□□□□ -0.25
SMTN-201ENST00000333137 PLA2G16P53816 162 aa13.5□□□□□ -0.25
SMTN-201ENST00000333137 BAATQ14032 418 aaPredicted RBP13.5□□□□□ -0.25
SMTN-201ENST00000333137 ALX1Q15699 326 aa13.5□□□□□ -0.25
SMTN-201ENST00000333137 Q3ZCU0 254 aa13.5□□□□□ -0.25
SMTN-201ENST00000333137 NHSL2Q5HYW2 709 aa13.5□□□□□ -0.25
SMTN-201ENST00000333137 ADGRD1Q6QNK2 874 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms