RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 HAPLN3Q96S86 360 aa13.55□□□□□ -0.24
TUBA1B-201ENST00000332858 WDR41Q9HAD4 459 aa13.55□□□□□ -0.24
TUBA1B-201ENST00000332858 GTSE1Q9NYZ3 720 aa13.55□□□□□ -0.24
TUBA1B-201ENST00000332858 IPO11Q9UI26 975 aaKnown RBP13.55□□□□□ -0.24
TUBA1B-201ENST00000332858 MID2Q9UJV3 735 aa13.55□□□□□ -0.24
TUBA1B-201ENST00000332858 AK5Q9Y6K8 562 aa13.55□□□□□ -0.24
TUBA1B-201ENST00000332858 FNDC1Q4ZHG4 1894 aaPredicted RBP13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 A0A1W2PQH9 124 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 CASQ2O14958 399 aaPredicted RBP13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 PEX11BO96011 259 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 MT-CO1P00395 513 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 HAPLN1P10915 354 aaPredicted RBP13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 HOXC13P31276 330 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 CD151P48509 253 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 GPR15P49685 360 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 ZNF135P52742 658 aaPredicted RBP13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 C1QTNF8P60827 252 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 FOLH1Q04609 750 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 TLR1Q15399 786 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 UGP2Q16851 508 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 IL31Q6EBC2 164 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 POTEHQ6S545 545 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 PQLC1Q8N2U9 271 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 RSPH1Q8WYR4 309 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 PHF21BQ96EK2 531 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 GBP5Q96PP8 586 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 COL6A2P12110 1019 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 CPB1P15086 417 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 CTGFP29279 349 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 SULT2A1Q06520 285 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 ZNF33AQ06730 810 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 SLC10A7Q0GE19 358 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 GK3PQ14409 553 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 OGFRL1Q5TC84 451 aaPredicted RBP13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 PIK3R6Q5UE93 754 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 SLC30A9Q6PML9 568 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 SCN4BQ8IWT1 228 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 BHLHE22Q8NFJ8 381 aaPredicted RBP13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 KLHL32Q96NJ5 620 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 COPS7BQ9H9Q2 264 aaPredicted RBP13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 ABCC13Q9NSE7 274 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 PSMD13Q9UNM6 376 aa13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 COL4A4P53420 1690 aaPredicted RBP13.54□□□□□ -0.24
TUBA1B-201ENST00000332858 OR51F1A6NGY5 319 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 KCNU1A8MYU2 1149 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 PSMD3O43242 534 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 ZNF189O75820 626 aaPredicted RBP13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 CNTN5O94779 1100 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 THPOP40225 353 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 GEMP55040 296 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 C16orf89Q6UX73 402 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 PTAR1Q7Z6K3 402 aaPredicted RBP13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 MRPL10Q7Z7H8 261 aaKnown RBP13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 METTL23Q86XA0 190 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 PCDH20Q8N6Y1 951 aaKnown RBP13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 GPR152Q8TDT2 470 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 ENTPD7Q9NQZ7 604 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 KCTD3Q9Y597 815 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 PTPRDP23468 1912 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 IQCA1LA6NCM1 817 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 AHCYL1O43865 530 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 CYP11A1P05108 521 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 ARSDP51689 593 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 TMEM207Q6UWW9 146 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 OR13J1Q8NGT2 312 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 MRPL57Q9BQC6 102 aaKnown RBP13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 UBE2OQ9C0C9 1292 aaKnown RBP13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 SMOC2Q9H3U7 446 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 CATSPERBQ9H7T0 1116 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 NT5MQ9NPB1 228 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 UBAP1Q9NZ09 502 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 VTI1BQ9UEU0 232 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 PRPF19Q9UMS4 504 aaKnown RBP13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 NLRC5Q86WI3 1866 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 M0QZQ0 153 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 AP3B1O00203 1094 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 TBX18O95935 607 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 CCDC166P0CW27 439 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 DNAJB2P25686 324 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 CD86P42081 329 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 IRX1P78414 480 aaPredicted RBP13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 ITKQ08881 620 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 MGAT3Q09327 533 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 PTPRCAPQ14761 206 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 PDK3Q15120 406 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 TAF1CQ15572 869 aaPredicted RBP13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 DDR2Q16832 855 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 ALFQ53S48 1182 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 AFMIDQ63HM1 303 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 KDELC1Q6UW63 502 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 RTL3Q8N8U3 475 aaKnown RBP13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 SPPL2BQ8TCT7 592 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 MAELQ96JY0 434 aaKnown RBP13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 NCKIPSDQ9NZQ3 722 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 DTNAQ9Y4J8 743 aa13.53□□□□□ -0.24
TUBA1B-201ENST00000332858 SCN10AQ9Y5Y9 1956 aa13.52□□□□□ -0.24
TUBA1B-201ENST00000332858 A8MT66 165 aa13.52□□□□□ -0.24
TUBA1B-201ENST00000332858 MLLT6P55198 1093 aaPredicted RBP13.52□□□□□ -0.24
TUBA1B-201ENST00000332858 DSC2Q02487 901 aa13.52□□□□□ -0.24
TUBA1B-201ENST00000332858 ART3Q13508 389 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms