RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 HPS6Q86YV9 775 aa18.34■□□□□ 0.53
LYSMD4-201ENST00000332728 TMEM151AQ8N4L1 468 aa18.34■□□□□ 0.53
LYSMD4-201ENST00000332728 TXNDC5Q8NBS9 432 aaKnown RBP18.34■□□□□ 0.53
LYSMD4-201ENST00000332728 MAGEC3Q8TD91 643 aa18.34■□□□□ 0.53
LYSMD4-201ENST00000332728 SLC45A3Q96JT2 553 aa18.34■□□□□ 0.53
LYSMD4-201ENST00000332728 TSGA13Q96PP4 275 aa18.34■□□□□ 0.53
LYSMD4-201ENST00000332728 CREBZFQ9NS37 354 aa18.34■□□□□ 0.53
LYSMD4-201ENST00000332728 MAGEB16A2A368 324 aa18.33■□□□□ 0.53
LYSMD4-201ENST00000332728 MMP2P08253 660 aa18.33■□□□□ 0.53
LYSMD4-201ENST00000332728 SP100P23497 879 aaPredicted RBP18.33■□□□□ 0.53
LYSMD4-201ENST00000332728 SLC6A4P31645 630 aa18.33■□□□□ 0.53
LYSMD4-201ENST00000332728 RAB10P61026 200 aa18.33■□□□□ 0.53
LYSMD4-201ENST00000332728 TMPRSS6Q8IU80 811 aa18.33■□□□□ 0.53
LYSMD4-201ENST00000332728 USP13Q92995 863 aaPredicted RBP18.33■□□□□ 0.53
LYSMD4-201ENST00000332728 SLC39A13Q96H72 371 aa18.33■□□□□ 0.53
LYSMD4-201ENST00000332728 RSRC1Q96IZ7 334 aaKnown RBP18.33■□□□□ 0.53
LYSMD4-201ENST00000332728 DNAJC1Q96KC8 554 aaKnown RBP18.33■□□□□ 0.53
LYSMD4-201ENST00000332728 LENG8Q96PV6 779 aaPredicted RBP18.33■□□□□ 0.53
LYSMD4-201ENST00000332728 POMKQ9H5K3 350 aa18.33■□□□□ 0.53
LYSMD4-201ENST00000332728 TLE6Q9H808 572 aa18.33■□□□□ 0.53
LYSMD4-201ENST00000332728 OXSMQ9NWU1 459 aa18.33■□□□□ 0.53
LYSMD4-201ENST00000332728 RAD54BQ9Y620 910 aa18.33■□□□□ 0.53
LYSMD4-201ENST00000332728 PTPRDP23468 1912 aa18.33■□□□□ 0.52
LYSMD4-201ENST00000332728 ATP6AP2A0A1C7CYW4 349 aa18.33■□□□□ 0.52
LYSMD4-201ENST00000332728 LRRC14BA6NHZ5 514 aa18.33■□□□□ 0.52
LYSMD4-201ENST00000332728 ATP6AP2O75787 350 aa18.33■□□□□ 0.52
LYSMD4-201ENST00000332728 MPOP05164 745 aa18.33■□□□□ 0.52
LYSMD4-201ENST00000332728 SKIP12755 728 aa18.33■□□□□ 0.52
LYSMD4-201ENST00000332728 ATF6P18850 670 aa18.33■□□□□ 0.52
LYSMD4-201ENST00000332728 TCN1P20061 433 aaPredicted RBP18.33■□□□□ 0.52
LYSMD4-201ENST00000332728 CD151P48509 253 aa18.33■□□□□ 0.52
LYSMD4-201ENST00000332728 SERPINH1P50454 418 aaKnown RBP18.33■□□□□ 0.52
LYSMD4-201ENST00000332728 PRAMEP78395 509 aa18.33■□□□□ 0.52
LYSMD4-201ENST00000332728 CBLBQ13191 982 aa18.33■□□□□ 0.52
LYSMD4-201ENST00000332728 MAP3K21Q5TCX8 1036 aa18.33■□□□□ 0.52
LYSMD4-201ENST00000332728 SNX30Q5VWJ9 437 aa18.33■□□□□ 0.52
LYSMD4-201ENST00000332728 APBB2Q92870 758 aa18.33■□□□□ 0.52
LYSMD4-201ENST00000332728 PCDHB12Q9Y5F1 795 aa18.33■□□□□ 0.52
LYSMD4-201ENST00000332728 KIAA0100Q14667 2235 aaKnown RBP18.33■□□□□ 0.52
LYSMD4-201ENST00000332728 RGRP47804 291 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 SCNN1BP51168 640 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 NME5P56597 212 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 SLC12A1Q13621 1099 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 SPOUT1Q5T280 376 aaKnown RBP18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 TSTD2Q5T7W7 516 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 GPR158Q5T848 1215 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 TLDC1Q6P9B6 456 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 KDELC1Q6UW63 502 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 NSMCE3Q96MG7 304 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 CASD1Q96PB1 797 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 FBXO44Q9H4M3 255 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 FAM96AQ9H5X1 160 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 ALG9Q9H6U8 611 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 PRDM16Q9HAZ2 1276 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 PPM1HQ9ULR3 514 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 STX16-NPEPL1H3BU86 382 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 EOMESO95936 686 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 GRK2P25098 689 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 KCNC1P48547 511 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 CDKN2DP55273 166 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 CDH13P55290 713 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 NAB1Q13506 487 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 LSM12Q3MHD2 195 aaKnown RBP18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 SH2D4BQ5SQS7 431 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 OR13J1Q8NGT2 312 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 BPIFA1Q9NP55 256 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 TCF7L2Q9NQB0 619 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 ENTPD7Q9NQZ7 604 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 NMRK1Q9NWW6 199 aa18.32■□□□□ 0.52
LYSMD4-201ENST00000332728 C9JVG2 144 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 TFEBP19484 476 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 CYP2C18P33260 490 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 MAGEA12P43365 314 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 HARS2P49590 506 aaKnown RBP18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 COPAP53621 1224 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 CSE1LP55060 971 aaKnown RBP18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 PKNOX1P55347 436 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 WASHC2DQ5SRD0 308 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 ILKAPQ9H0C8 392 aaPredicted RBP18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 GPAMQ9HCL2 828 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 GIMAP2Q9UG22 337 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 ZFP37Q9Y6Q3 630 aaPredicted RBP18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 PPP6CO00743 305 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 RENBPP51606 427 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 ZNF235Q14590 738 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 INSCQ1MX18 579 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 FAM26DQ5JW98 314 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 CLEC6AQ6EIG7 209 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 ATP6V0D2Q8N8Y2 350 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 SLC26A7Q8TE54 656 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 IFT43Q96FT9 208 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 SLC25A51Q9H1U9 297 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 HMX1Q9NP08 348 aaPredicted RBP18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 TLR8Q9NR97 1041 aaKnown RBP18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 SZT2Q5T011 3432 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 UBA6A0AVT1 1052 aaPredicted RBP18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 CDKN1CP49918 316 aaPredicted RBP18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 TIGD7Q6NT04 549 aaPredicted RBP18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 SNX32Q86XE0 403 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms