RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.96□□□□□ -1.14
VMA21-201ENST00000330374 RBMX2Q9Y388 322 aaKnown RBP7.96□□□□□ -1.14
VMA21-201ENST00000330374 CENPFP49454 3210 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 A0A087WXM4 84 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 KDM4FA0A1W2PPD8 638 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 FAM72CH0Y354 149 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 EEF2KO00418 725 aaKnown RBP7.95□□□□□ -1.14
VMA21-201ENST00000330374 NR5A2O00482 541 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 FBP2O00757 339 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 B4GAT1O43505 415 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 TIMM44O43615 452 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 SRP72O76094 671 aaKnown RBP7.95□□□□□ -1.14
VMA21-201ENST00000330374 ARIH2O95376 493 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 CHRM3P20309 590 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 ATP6V1B2P21281 511 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 SEPT6Q14141 434 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 ANO4Q32M45 955 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 ZIK1Q3SY52 487 aaPredicted RBP7.95□□□□□ -1.14
VMA21-201ENST00000330374 GJC2Q5T442 439 aaPredicted RBP7.95□□□□□ -1.14
VMA21-201ENST00000330374 FAM72AQ5TYM5 149 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 FAM72DQ6L9T8 149 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 NCCRP1Q6ZVX7 275 aaPredicted RBP7.95□□□□□ -1.14
VMA21-201ENST00000330374 FAM35AQ86V20 835 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 FAM72BQ86X60 149 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 GMLQ99445 158 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 MTG1Q9BT17 334 aaPredicted RBP7.95□□□□□ -1.14
VMA21-201ENST00000330374 MUC3BQ9H195 1237 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 C2orf40Q9H1Z8 148 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 R3HDMLQ9H3Y0 253 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 CYP3A43Q9HB55 503 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 PCDH12Q9NPG4 1184 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 SLC8A2Q9UPR5 921 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 ACOT9Q9Y305 439 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 NME7Q9Y5B8 376 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 CLOCKO15516 846 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 JCHAINP01591 159 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 NCAM1P13591 858 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 LMO2P25791 158 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 MAP4P27816 1152 aaKnown RBP7.95□□□□□ -1.14
VMA21-201ENST00000330374 HMOX2P30519 316 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 KPNA1P52294 538 aaPredicted RBP7.95□□□□□ -1.14
VMA21-201ENST00000330374 C1QTNF8P60827 252 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 PHEXP78562 749 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 MBTD1Q05BQ5 628 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 DPYSQ14117 519 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 OTOP3Q7RTS5 596 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 CNTD1Q8N815 330 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 KDM1BQ8NB78 822 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 TXNDC5Q8NBS9 432 aaKnown RBP7.95□□□□□ -1.14
VMA21-201ENST00000330374 PLEKHA8Q96JA3 519 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 COX4I2Q96KJ9 171 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 SPAG4Q9NPE6 437 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 DUS2Q9NX74 493 aaKnown RBP7.95□□□□□ -1.14
VMA21-201ENST00000330374 PTGDR2Q9Y5Y4 395 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 TADA2AO75478 443 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 AHSGP02765 367 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 FUCA1P04066 466 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 SLC35E2BP0CK96 405 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 PTPRAP18433 802 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 NDUFV1P49821 464 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 SLC12A2P55011 1212 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 RELAQ04206 551 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 ADIGQ0VDE8 80 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 STX5Q13190 355 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 TGFBIQ15582 683 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 ZNF618Q5T7W0 954 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 CYS1Q717R9 158 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 CLEC14AQ86T13 490 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 PSTKQ8IV42 348 aaKnown RBP7.95□□□□□ -1.14
VMA21-201ENST00000330374 CROCCP3Q8IVE0 287 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 RGL4Q8IZJ4 473 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 CENPSQ8N2Z9 138 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 RYBPQ8N488 228 aaPredicted RBP7.95□□□□□ -1.14
VMA21-201ENST00000330374 LZTR1Q8N653 840 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 SPATA22Q8NHS9 363 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 SLC2A14Q8TDB8 520 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 SLC35F5Q8WV83 523 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 IRGQQ8WZA9 623 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 C18orf25Q96B23 403 aaPredicted RBP7.95□□□□□ -1.14
VMA21-201ENST00000330374 SPATA33Q96N06 139 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 CDC6Q99741 560 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 UNC93B1Q9H1C4 597 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 SLC38A7Q9NVC3 462 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 IGSF9Q9P2J2 1179 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 FKBPLQ9UIM3 349 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 CROTQ9UKG9 612 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 DNAH12Q6ZR08 3092 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 H3BMQ9 156 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 CLDN5O00501 218 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 CABYRO75952 493 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 CES1P23141 567 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 PTPN3P26045 913 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 CD97P48960 835 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 TSPY1Q01534 308 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 USP41Q3LFD5 358 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 FUT11Q495W5 492 aa7.95□□□□□ -1.14
VMA21-201ENST00000330374 OTUD3Q5T2D3 398 aaPredicted RBP7.95□□□□□ -1.14
VMA21-201ENST00000330374 CENPLQ8N0S6 344 aaPredicted RBP7.95□□□□□ -1.14
VMA21-201ENST00000330374 MAGEE2Q8TD90 523 aaPredicted RBP7.95□□□□□ -1.14
VMA21-201ENST00000330374 ABHD8Q96I13 439 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms