RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 CSMD2Q7Z408 3487 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 RP1P56715 2156 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 K7ERI5 159 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 PPEF2O14830 753 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 DLGAP3O95886 979 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 ABL1P00519 1130 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 ATP5BP06576 529 aaKnown RBP6.78□□□□□ -1.32
CSTF3-201ENST00000323959 CCDC175P0C221 793 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 CHKAP35790 457 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 DSG2Q14126 1118 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.78□□□□□ -1.32
CSTF3-201ENST00000323959 TRIM65Q6PJ69 517 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 NCCRP1Q6ZVX7 275 aaPredicted RBP6.78□□□□□ -1.32
CSTF3-201ENST00000323959 AGBL5Q8NDL9 886 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 TSGA10Q9BZW7 698 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 PDE7BQ9NP56 450 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 ST6GALNAC2Q9UJ37 374 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 FRMD4BQ9Y2L6 1034 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 PCDHGA10Q9Y5H3 936 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 CTIFO43310 598 aaKnown RBP6.78□□□□□ -1.32
CSTF3-201ENST00000323959 PRPF6O94906 941 aaKnown RBP6.78□□□□□ -1.32
CSTF3-201ENST00000323959 ASLP04424 464 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 DLDP09622 509 aaKnown RBP6.78□□□□□ -1.32
CSTF3-201ENST00000323959 ZDHHC11BP0C7U3 371 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 IRF1P10914 325 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 HNRNPA2B1P22626 353 aaKnown RBP6.78□□□□□ -1.32
CSTF3-201ENST00000323959 PNPLA4P41247 253 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 VAMP7P51809 220 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 SMSP52788 366 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 HGSNATQ68CP4 663 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 LINGO4Q6UY18 593 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 FAM186BQ8IYM0 893 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 SLC22A18ASQ8N1D0 253 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 CPXM2Q8N436 756 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 AADATQ8N5Z0 425 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 XXYLT1Q8NBI6 393 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 LMO3Q8TAP4 145 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 EPS8L1Q8TE68 723 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 COG1Q8WTW3 980 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 COX4I2Q96KJ9 171 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 SYT11Q9BT88 431 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 MAPK8IP1Q9UQF2 711 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 RNF215Q9Y6U7 377 aa6.78□□□□□ -1.32
CSTF3-201ENST00000323959 SPTY2D1-AS1A0A0U1RR47 76 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 K7ENM7 598 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 ZBTB39O15060 712 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 ZW10O43264 779 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 TACC1O75410 805 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 DNAJB5O75953 348 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 SERPING1P05155 500 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 YWHAQP27348 245 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 KRT9P35527 623 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 CYLC1P35663 651 aaPredicted RBP6.77□□□□□ -1.33
CSTF3-201ENST00000323959 C1QBPQ07021 282 aaKnown RBP6.77□□□□□ -1.33
CSTF3-201ENST00000323959 ARHGAP44Q17R89 818 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 HNRNPA1L2Q32P51 320 aaKnown RBP6.77□□□□□ -1.33
CSTF3-201ENST00000323959 CCDC40Q4G0X9 1142 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 KLHDC7AQ5VTJ3 777 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 TMEM215Q68D42 235 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 CEACAM20Q6UY09 585 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 MEX3BQ6ZN04 569 aaKnown RBP6.77□□□□□ -1.33
CSTF3-201ENST00000323959 GBP6Q6ZN66 633 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 GCNT7Q6ZNI0 430 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 ENOSF1Q7L5Y1 443 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 TAS1R3Q7RTX0 852 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 KDELC2Q7Z4H8 507 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 KCNMB4Q86W47 210 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 ZNF557Q8N988 423 aaPredicted RBP6.77□□□□□ -1.33
CSTF3-201ENST00000323959 KYQ8NBH2 561 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 EHBP1Q8NDI1 1231 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 NEK11Q8NG66 645 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 SORCS1Q8WY21 1168 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 HAUS4Q9H6D7 363 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 SLC24A3Q9HC58 644 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 ACSS2Q9NR19 701 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 LUZP4Q9P127 313 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 RABGEF1Q9UJ41 708 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 B3GNT3Q9Y2A9 372 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 M0QYT0 321 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 TULP1O00294 542 aaPredicted RBP6.77□□□□□ -1.33
CSTF3-201ENST00000323959 NDUFA10O95299 355 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 JUNDP17535 347 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 PON1P27169 355 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 LHX1P48742 406 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 FMO5P49326 533 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 ETF1P62495 437 aaKnown RBP6.77□□□□□ -1.33
CSTF3-201ENST00000323959 PSMD6Q15008 389 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 SURF1Q15526 300 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 PLEKHN1Q494U1 663 aaPredicted RBP6.77□□□□□ -1.33
CSTF3-201ENST00000323959 RAD9BQ6WBX8 426 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 MYRIPQ8NFW9 859 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 CCDC127Q96BQ5 260 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 ZNF830Q96NB3 372 aaPredicted RBP6.77□□□□□ -1.33
CSTF3-201ENST00000323959 SMAD5Q99717 465 aaKnown RBP6.77□□□□□ -1.33
CSTF3-201ENST00000323959 KIFC3Q9BVG8 833 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 TRIM55Q9BYV6 548 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 TWSG1Q9GZX9 223 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 PKDREJQ9NTG1 2253 aa6.77□□□□□ -1.33
CSTF3-201ENST00000323959 POLEQ07864 2286 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 A0A0A6YYK5 440 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms