RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 OR6B3Q8NGW1 331 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 GIPC3Q8TF64 312 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 NXNL1Q96CM4 212 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 NT5C1AQ9BXI3 368 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 OSBPL2Q9H1P3 480 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 ATXN3LQ9H3M9 355 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 PRDM16Q9HAZ2 1276 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 TUBGCP4Q9UGJ1 667 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 AP4S1Q9Y587 144 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 A0A1W2PPW3 197 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 C17orf102A2RUQ5 167 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 CLDN5O00501 218 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 ACKR2O00590 384 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 ZBTB24O43167 697 aaPredicted RBP12.3□□□□□ -0.44
SEC24A-201ENST00000322887 B4GAT1O43505 415 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 NCAM1P13591 858 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 NR4A1P22736 598 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 CES1P23141 567 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 LIMK2P53671 638 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 PSME3P61289 254 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 DPYSL2Q16555 572 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 DCAF6Q58WW2 860 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 IER5Q5VY09 327 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 TAF2Q6P1X5 1199 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 HFE2Q6ZVN8 426 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 PGAM4Q8N0Y7 254 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 ADCY4Q8NFM4 1077 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 FNDC8Q8TC99 324 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 ACMSDQ8TDX5 336 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 ZMAT2Q96NC0 199 aaKnown RBP12.3□□□□□ -0.44
SEC24A-201ENST00000322887 SERPINI1Q99574 410 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 STN1Q9H668 368 aaKnown RBP12.3□□□□□ -0.44
SEC24A-201ENST00000322887 ZBTB26Q9HCK0 441 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 STARD7Q9NQZ5 370 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 NDUFA13Q9P0J0 144 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 BLOC1S6Q9UL45 172 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 AURKCQ9UQB9 309 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 USP3Q9Y6I4 520 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 SMIM35A0A1B0GVV1 85 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 H6PDO95479 791 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 ABCD1P33897 745 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 POU5F1BQ06416 359 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 IFRD2Q12894 506 aaPredicted RBP12.29□□□□□ -0.44
SEC24A-201ENST00000322887 USP10Q14694 798 aaKnown RBP12.29□□□□□ -0.44
SEC24A-201ENST00000322887 SNX17Q15036 470 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 FBXO48Q5FWF7 155 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 FGD3Q5JSP0 725 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 SYPL2Q5VXT5 272 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 CLEC6AQ6EIG7 209 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 ZNF554Q86TJ5 538 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 KCNMB4Q86W47 210 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 SNX29P2Q8IUI4 249 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 RBM12BQ8IXT5 1001 aaKnown RBP12.29□□□□□ -0.44
SEC24A-201ENST00000322887 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.29□□□□□ -0.44
SEC24A-201ENST00000322887 SH3RF2Q8TEC5 729 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 CANT1Q8WVQ1 401 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 C12orf43Q96C57 262 aaKnown RBP12.29□□□□□ -0.44
SEC24A-201ENST00000322887 KIF12Q96FN5 646 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 CELF6Q96J87 481 aaKnown RBP12.29□□□□□ -0.44
SEC24A-201ENST00000322887 PFDN4Q9NQP4 134 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 DUS2Q9NX74 493 aaKnown RBP12.29□□□□□ -0.44
SEC24A-201ENST00000322887 DPP3Q9NY33 737 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 VANGL2Q9ULK5 521 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 CNOT6Q9ULM6 557 aaKnown RBP12.29□□□□□ -0.44
SEC24A-201ENST00000322887 CDYLQ9Y232 598 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 ARVCFO00192 962 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 MDM4O15151 490 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 BEST1O76090 585 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 CCDC166P0CW27 439 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 EFNA5P52803 228 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 ZBTB17Q13105 803 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 MXD4Q14582 209 aaPredicted RBP12.29□□□□□ -0.44
SEC24A-201ENST00000322887 AGKQ53H12 422 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 LDLRAP1Q5SW96 308 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 GPR107Q5VW38 600 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 ARHGAP17Q68EM7 881 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 LRRC8EQ6NSJ5 796 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 OTOP3Q7RTS5 596 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 CLEC14AQ86T13 490 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 FAM35AQ86V20 835 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 CENPLQ8N0S6 344 aaPredicted RBP12.29□□□□□ -0.44
SEC24A-201ENST00000322887 DEFB106AQ8N104 65 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 NPWQ8N729 165 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 SPATA22Q8NHS9 363 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 RP9Q8TA86 221 aaKnown RBP12.29□□□□□ -0.44
SEC24A-201ENST00000322887 SLC35F5Q8WV83 523 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 MLPHQ9BV36 600 aaPredicted RBP12.29□□□□□ -0.44
SEC24A-201ENST00000322887 FRMD8Q9BZ67 464 aaPredicted RBP12.29□□□□□ -0.44
SEC24A-201ENST00000322887 GOLGA2P5Q9HBQ8 144 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 SETD4Q9NVD3 440 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 SLC2A6Q9UGQ3 507 aa12.29□□□□□ -0.44
SEC24A-201ENST00000322887 LAMA2P24043 3122 aaKnown RBP12.29□□□□□ -0.44
SEC24A-201ENST00000322887 H3BNH8 94 aa12.28□□□□□ -0.44
SEC24A-201ENST00000322887 HTRA2O43464 458 aaPredicted RBP12.28□□□□□ -0.44
SEC24A-201ENST00000322887 AKAP10O43572 662 aa12.28□□□□□ -0.44
SEC24A-201ENST00000322887 ZNF23P17027 643 aa12.28□□□□□ -0.44
SEC24A-201ENST00000322887 ARF4P18085 180 aaPredicted RBP12.28□□□□□ -0.44
SEC24A-201ENST00000322887 CNTFP26441 200 aa12.28□□□□□ -0.44
SEC24A-201ENST00000322887 GRIA3P42263 894 aa12.28□□□□□ -0.44
SEC24A-201ENST00000322887 CSE1LP55060 971 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms