RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 TMTC4Q5T4D3 741 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 OGFRL1Q5TC84 451 aaPredicted RBP12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 KBTBD6Q86V97 674 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 SNX31Q8N9S9 440 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 BORCS5Q969J3 196 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 SMARCD1Q96GM5 515 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 SENP8Q96LD8 212 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 DACH2Q96NX9 599 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 PCYT2Q99447 389 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 DAPK2Q9UIK4 370 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 COL2A1P02458 1487 aaPredicted RBP12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 A0A0J9YYE9 177 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 MGEA5O60502 916 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 TSPAN1O60635 241 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 AIF1P55008 147 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 ITGADQ13349 1161 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 PSMD5Q16401 504 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 TFAP2DQ7Z6R9 452 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 SPPL2CQ8IUH8 684 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 ERI1Q8IV48 349 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 SFRP1Q8N474 314 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 C1orf50Q9BV19 199 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 OXCT2Q9BYC2 517 aaPredicted RBP12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 OSBPL6Q9BZF3 934 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 C20orf27Q9GZN8 174 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 SCN3BQ9NY72 215 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 TRMT6Q9UJA5 497 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 MYH9P35579 1960 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 NPHS1O60500 1241 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 CLASP2O75122 1294 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 ODC1P11926 461 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 CDH2P19022 906 aaPredicted RBP12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 SLC7A1P30825 629 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 ADCYAP1R1P41586 468 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 KLHL23Q8NBE8 558 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 OR52K2Q8NGK3 314 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 SPATA22Q8NHS9 363 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 DNAJB3Q8WWF6 145 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 WDR83Q9BRX9 315 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 ZBTB26Q9HCK0 441 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 DNAAF2Q9NVR5 837 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 PPP2R3BQ9Y5P8 575 aa12.84□□□□□ -0.35
DNMT3A-202ENST00000321117 TCRBV5S1A1TA0A578 114 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 NEMP2A6NFY4 417 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 TMEM233B4DJY2 109 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 THP07101 528 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 SLC2A3P11169 496 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 SERPINB1P30740 379 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 ESRP1Q6NXG1 681 aaKnown RBP12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 TMEM126BQ8IUX1 230 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 FNDC5Q8NAU1 212 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 CEP19Q96LK0 163 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 HOPXQ9BPY8 73 aaPredicted RBP12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 CXorf21Q9HAI6 301 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 GLOD4Q9HC38 313 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 COMMD8Q9NX08 183 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 UTP6Q9NYH9 597 aaKnown RBP12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 SH3GLB1Q9Y371 365 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 MYO1GB0I1T2 1018 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 ZNF487B1APH4 448 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 E7ENX8 843 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 SYNCRIPO60506 623 aaKnown RBP12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 EDN1P05305 212 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 LMO2P25791 158 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 CLK1P49759 484 aaKnown RBP12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 NAA20P61599 178 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 TAZQ16635 292 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 PITRM1Q5JRX3 1037 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 STEAP4Q687X5 459 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 HEXDCQ8WVB3 486 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 GOLGA2P5Q9HBQ8 144 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 CNGB3Q9NQW8 809 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 VWA7Q9Y334 891 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 NHSQ6T4R5 1651 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 KPNA4O00629 521 aaPredicted RBP12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 DENRO43583 198 aaKnown RBP12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 DLX3O60479 287 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 CCR10P46092 362 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 TRPC1P48995 793 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 CDH15P55291 814 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 NIPAL4Q0D2K0 466 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 SNX17Q15036 470 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 RGS21Q2M5E4 152 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 CLEC6AQ6EIG7 209 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 ZDHHC13Q8IUH4 622 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 RPRD1AQ96P16 312 aaPredicted RBP12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 COLEC11Q9BWP8 271 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 RHOBTB2Q9BYZ6 727 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 VTA1Q9NP79 307 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 SEMA4BQ9NPR2 832 aaPredicted RBP12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 BTRCQ9Y297 605 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 ATP11BQ9Y2G3 1177 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 STRCP1A6NGW2 1772 aa12.83□□□□□ -0.36
DNMT3A-202ENST00000321117 BBIP1A8MTZ0 92 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 AZIN1O14977 448 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 VPS4BO75351 444 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 VPS26AO75436 327 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 CCNA2P20248 432 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 POLD2P49005 469 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 EIF2B2P49770 351 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 200.1 ms