RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 LYNP07948 512 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 NR2F6P10588 404 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 CDK9P50750 372 aaKnown RBP16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 MYBPC1Q00872 1141 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 CES3Q6UWW8 571 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 FAM92BQ6ZTR7 304 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 KBTBD7Q8WVZ9 684 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 CASKO14936 926 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 CCNE2O96020 404 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 DDR1Q08345 913 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 TROAPQ12815 778 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 PARP6Q2NL67 630 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 GPAT3Q53EU6 434 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 THOC7Q6I9Y2 204 aaKnown RBP16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 NKX2-3Q8TAU0 364 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 TEFMQ96QE5 360 aaKnown RBP16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 OR14I1A6ND48 311 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 MAGEB3O15480 346 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 CCNYL3P0C7X3 344 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 CETPP11597 493 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 TXNDC11Q6PKC3 985 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 MSL3Q8N5Y2 521 aaKnown RBP16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 GMCL1P1Q8NEA9 526 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 SENP6Q9GZR1 1112 aaPredicted RBP16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 AASDHPPTQ9NRN7 309 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 ATF5Q9Y2D1 282 aaPredicted RBP16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 NADKO95544 446 aaPredicted RBP16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 TFRCP02786 760 aaKnown RBP16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 CBFBQ13951 182 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 PCID2Q5JVF3 399 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 PIWIL4Q7Z3Z4 852 aaKnown RBP16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 LENG9Q96B70 501 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 CERS2Q96G23 380 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 MAGEL2Q9UJ55 1249 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 PNPLA6Q8IY17 1366 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 DLG5Q8TDM6 1919 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 ULK1O75385 1050 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 PTPN5P54829 565 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 FAM182BQ5T319 152 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 SV2AQ7L0J3 742 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 OAFQ86UD1 273 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 MLXQ9UH92 298 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 PDE4DIPQ5VU43 2346 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 TPD52L2O43399 206 aaKnown RBP16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 PSMA1P25786 263 aaKnown RBP16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 RAB10P61026 200 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 CDYL2Q8N8U2 506 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 ZNF304Q9HCX3 659 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 NECTIN3Q9NQS3 549 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 SCGNO76038 276 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 TGDSO95455 350 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 IFNGP01579 166 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 GALNT3Q14435 633 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 SLC41A1Q8IVJ1 513 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 TSEN2Q8NCE0 465 aaKnown RBP16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 NDNQ99608 321 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 SLC35C2Q9NQQ7 365 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 ZNF70Q9UC06 446 aaPredicted RBP16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 SAMD4AQ9UPU9 718 aaKnown RBP16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 NINQ8N4C6 2090 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 UGT2B17O75795 530 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 METTL18O95568 372 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 SHBGP04278 402 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 ERCC2P18074 760 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 ATP5F1P24539 256 aaPredicted RBP16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 SLC6A3Q01959 620 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 RALGDSQ12967 914 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 MYBPC3Q14896 1274 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 TMPRSS11AQ6ZMR5 421 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 CCDC115Q96NT0 180 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 CIPCQ9C0C6 399 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 ZNF224Q9NZL3 707 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 SLC28A1O00337 649 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 ALDH3A2P51648 485 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 MBTD1Q05BQ5 628 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 FAM171BQ6P995 826 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 ALLCQ8N6M5 410 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 C17orf50Q8WW18 174 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 AHCYL2Q96HN2 611 aaKnown RBP16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 DNAJC1Q96KC8 554 aaKnown RBP16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 AGO4Q9HCK5 861 aaKnown RBP16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 CIDEBQ9UHD4 219 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 RAP2CQ9Y3L5 183 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 PCDHGA3Q9Y5H0 932 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 VTNP04004 478 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 SCN1BQ07699 218 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 KCNA10Q16322 511 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 FAM117BQ6P1L5 589 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 RNF181Q9P0P0 153 aa16.98■□□□□ 0.31
SMCHD1-201ENST00000320876 EIF4BP23588 611 aaKnown RBP16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 ATN1P54259 1190 aaPredicted RBP16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 PRKG2Q13237 762 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 GPRIN3Q6ZVF9 776 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 SP140LQ9H930 580 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 CDH4P55283 916 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 SWT1Q5T5J6 900 aaKnown RBP16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 FAM151AQ8WW52 585 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 EDEM1Q92611 657 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 PHF12Q96QT6 1004 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms