RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 ZNF614Q8N883 585 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 GLMNQ92990 594 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 SLC25A23Q9BV35 468 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 PIGVQ9NUD9 493 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 CHCHD3Q9NX63 227 aaKnown RBP16.62■□□□□ 0.25
CLIP4-201ENST00000320081 GMIPQ9P107 970 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 A0A1W2PQ67 120 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 KDM1AO60341 852 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 TRPC1P48995 793 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 SLC5A3P53794 718 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 SLC16A1P53985 500 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 HADHBP55084 474 aaKnown RBP16.61■□□□□ 0.25
CLIP4-201ENST00000320081 PDK3Q15120 406 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 OR7D4Q8NG98 312 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 PEBP4Q96S96 227 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 GLOD4Q9HC38 313 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 ATRNL1Q5VV63 1379 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 MGAT4DA6NG13 374 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 C16orf96A6NNT2 1141 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 PEX2P28328 305 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 ECHS1P30084 290 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 TAS2R39P59534 338 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 GCNT7Q6ZNI0 430 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 TMEM86AQ8N2M4 240 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 NAT8LQ8N9F0 302 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 SEPT8Q92599 483 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 AGO3Q9H9G7 860 aaKnown RBP16.61■□□□□ 0.25
CLIP4-201ENST00000320081 RAP2CQ9Y3L5 183 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 DPPA5A6NC42 116 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 TMEM233B4DJY2 109 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 F8W810 466 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 ATP6V1C1P21283 382 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 CRYBB1P53674 252 aaPredicted RBP16.61■□□□□ 0.25
CLIP4-201ENST00000320081 IL2P60568 153 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 PPIDQ08752 370 aaKnown RBP16.61■□□□□ 0.25
CLIP4-201ENST00000320081 SREBF2Q12772 1141 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 COL9A2Q14055 689 aaPredicted RBP16.61■□□□□ 0.25
CLIP4-201ENST00000320081 FRG1Q14331 258 aaKnown RBP16.61■□□□□ 0.25
CLIP4-201ENST00000320081 SKIV2LQ15477 1246 aaKnown RBP16.61■□□□□ 0.25
CLIP4-201ENST00000320081 LIPMQ5VYY2 423 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 DOK6Q6PKX4 331 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 FAM151BQ6UXP7 276 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 STRADAQ7RTN6 431 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 OR4K2Q8NGD2 314 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 PPM1MQ96MI6 270 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 TBC1D23Q9NUY8 699 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 SEPT3Q9UH03 358 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 BLOC1S6Q9UL45 172 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 PSAT1Q9Y617 370 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 CLUHO75153 1309 aa16.61■□□□□ 0.25
CLIP4-201ENST00000320081 STX16-NPEPL1H3BU86 382 aa16.6■□□□□ 0.25
CLIP4-201ENST00000320081 LDLRP01130 860 aa16.6■□□□□ 0.25
CLIP4-201ENST00000320081 NR4A1P22736 598 aa16.6■□□□□ 0.25
CLIP4-201ENST00000320081 SMAD3P84022 425 aaKnown RBP16.6■□□□□ 0.25
CLIP4-201ENST00000320081 TJAP1Q5JTD0 557 aa16.6■□□□□ 0.25
CLIP4-201ENST00000320081 TRMT11Q7Z4G4 463 aaKnown RBP16.6■□□□□ 0.25
CLIP4-201ENST00000320081 VPS37AQ8NEZ2 397 aa16.6■□□□□ 0.25
CLIP4-201ENST00000320081 PPP1R2P1Q96PQ5 205 aa16.6■□□□□ 0.25
CLIP4-201ENST00000320081 ZYG11BQ9C0D3 744 aa16.6■□□□□ 0.25
CLIP4-201ENST00000320081 RRN3Q9NYV6 651 aa16.6■□□□□ 0.25
CLIP4-201ENST00000320081 ZMYND8Q9ULU4 1186 aaPredicted RBP16.6■□□□□ 0.25
CLIP4-201ENST00000320081 CLCA2Q9UQC9 943 aa16.6■□□□□ 0.25
CLIP4-201ENST00000320081 GGT5P36269 586 aa16.6■□□□□ 0.25
CLIP4-201ENST00000320081 CCR10P46092 362 aa16.6■□□□□ 0.25
CLIP4-201ENST00000320081 GSCP56915 257 aaPredicted RBP16.6■□□□□ 0.25
CLIP4-201ENST00000320081 PLCL1Q15111 1095 aa16.6■□□□□ 0.25
CLIP4-201ENST00000320081 LACTB2Q53H82 288 aaPredicted RBP16.6■□□□□ 0.25
CLIP4-201ENST00000320081 RETSATQ6NUM9 610 aa16.6■□□□□ 0.25
CLIP4-201ENST00000320081 ST13P5Q8NFI4 369 aaPredicted RBP16.6■□□□□ 0.25
CLIP4-201ENST00000320081 MAML3Q96JK9 1138 aa16.6■□□□□ 0.25
CLIP4-201ENST00000320081 ZNF556Q9HAH1 456 aa16.6■□□□□ 0.25
CLIP4-201ENST00000320081 H2AFYO75367 372 aaKnown RBP16.6■□□□□ 0.25
CLIP4-201ENST00000320081 IFNA8P32881 189 aa16.6■□□□□ 0.25
CLIP4-201ENST00000320081 BFSP2Q13515 415 aa16.6■□□□□ 0.25
CLIP4-201ENST00000320081 UGT3A1Q6NUS8 523 aa16.6■□□□□ 0.25
CLIP4-201ENST00000320081 ARCQ7LC44 396 aa16.6■□□□□ 0.25
CLIP4-201ENST00000320081 RALGPS2Q86X27 583 aaPredicted RBP16.6■□□□□ 0.25
CLIP4-201ENST00000320081 TMEM109Q9BVC6 243 aa16.6■□□□□ 0.25
CLIP4-201ENST00000320081 ACAT2Q9BWD1 397 aa16.6■□□□□ 0.25
CLIP4-201ENST00000320081 BBS2Q9BXC9 721 aa16.6■□□□□ 0.25
CLIP4-201ENST00000320081 RNF208Q9H0X6 261 aa16.6■□□□□ 0.25
CLIP4-201ENST00000320081 AAASQ9NRG9 546 aa16.6■□□□□ 0.25
CLIP4-201ENST00000320081 SNRPB2P08579 225 aaKnown RBP16.59■□□□□ 0.25
CLIP4-201ENST00000320081 HDCP19113 662 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 EFNA1P20827 205 aaPredicted RBP16.59■□□□□ 0.25
CLIP4-201ENST00000320081 WASHC5Q12768 1159 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 LRRC73Q5JTD7 316 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 AARS2Q5JTZ9 985 aaKnown RBP16.59■□□□□ 0.25
CLIP4-201ENST00000320081 RD3Q7Z3Z2 195 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 RHOJQ9H4E5 214 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 NOL11Q9H8H0 719 aaKnown RBP16.59■□□□□ 0.25
CLIP4-201ENST00000320081 VPS9D1Q9Y2B5 631 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 ARFGEF2Q9Y6D5 1785 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 MYO10Q9HD67 2058 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 TBX10O75333 385 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 PTPN3P26045 913 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 ADSLP30566 484 aaPredicted RBP16.59■□□□□ 0.25
CLIP4-201ENST00000320081 GPC1P35052 558 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 CCT8P50990 548 aa16.59■□□□□ 0.25
CLIP4-201ENST00000320081 RPL38P63173 70 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms