RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 HMBSP08397 361 aa20.81■□□□□ 0.92
TTC39C-202ENST00000317571 COX4I1P13073 169 aa20.81■□□□□ 0.92
TTC39C-202ENST00000317571 NFE2Q16621 373 aaPredicted RBP20.81■□□□□ 0.92
TTC39C-202ENST00000317571 LSM12Q3MHD2 195 aaKnown RBP20.81■□□□□ 0.92
TTC39C-202ENST00000317571 SH3RF2Q8TEC5 729 aa20.81■□□□□ 0.92
TTC39C-202ENST00000317571 NUF2Q9BZD4 464 aa20.81■□□□□ 0.92
TTC39C-202ENST00000317571 IGSF5Q9NSI5 407 aa20.81■□□□□ 0.92
TTC39C-202ENST00000317571 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.81■□□□□ 0.92
TTC39C-202ENST00000317571 PCDHB5Q9Y5E4 795 aa20.81■□□□□ 0.92
TTC39C-202ENST00000317571 CIB2O75838 187 aa20.8■□□□□ 0.92
TTC39C-202ENST00000317571 COL6A2P12110 1019 aa20.8■□□□□ 0.92
TTC39C-202ENST00000317571 ANPEPP15144 967 aa20.8■□□□□ 0.92
TTC39C-202ENST00000317571 TFEBP19484 476 aa20.8■□□□□ 0.92
TTC39C-202ENST00000317571 RPL14P50914 215 aaKnown RBP20.8■□□□□ 0.92
TTC39C-202ENST00000317571 NDST2P52849 883 aa20.8■□□□□ 0.92
TTC39C-202ENST00000317571 CTXN3Q4LDR2 81 aa20.8■□□□□ 0.92
TTC39C-202ENST00000317571 PPM1LQ5SGD2 360 aa20.8■□□□□ 0.92
TTC39C-202ENST00000317571 RNF111Q6ZNA4 994 aa20.8■□□□□ 0.92
TTC39C-202ENST00000317571 LENG8Q96PV6 779 aaPredicted RBP20.8■□□□□ 0.92
TTC39C-202ENST00000317571 FBXO44Q9H4M3 255 aa20.8■□□□□ 0.92
TTC39C-202ENST00000317571 MID2Q9UJV3 735 aa20.8■□□□□ 0.92
TTC39C-202ENST00000317571 HDAC3O15379 428 aa20.8■□□□□ 0.92
TTC39C-202ENST00000317571 CCNT2O60583 730 aaKnown RBP20.8■□□□□ 0.92
TTC39C-202ENST00000317571 TADA2AO75478 443 aa20.8■□□□□ 0.92
TTC39C-202ENST00000317571 KCNA5P22460 613 aa20.8■□□□□ 0.92
TTC39C-202ENST00000317571 PSEN1P49768 467 aa20.8■□□□□ 0.92
TTC39C-202ENST00000317571 ARSDP51689 593 aa20.8■□□□□ 0.92
TTC39C-202ENST00000317571 EPHB1P54762 984 aa20.8■□□□□ 0.92
TTC39C-202ENST00000317571 ARPP19P56211 112 aa20.8■□□□□ 0.92
TTC39C-202ENST00000317571 MRPL58Q14197 206 aaKnown RBP20.8■□□□□ 0.92
TTC39C-202ENST00000317571 MAP3K21Q5TCX8 1036 aa20.8■□□□□ 0.92
TTC39C-202ENST00000317571 FAM171A1Q5VUB5 890 aa20.8■□□□□ 0.92
TTC39C-202ENST00000317571 TMEM198Q66K66 360 aa20.8■□□□□ 0.92
TTC39C-202ENST00000317571 LRRC49Q8IUZ0 686 aa20.8■□□□□ 0.92
TTC39C-202ENST00000317571 LMNTD2Q8IXW0 634 aa20.8■□□□□ 0.92
TTC39C-202ENST00000317571 ARRDC2Q8TBH0 407 aa20.8■□□□□ 0.92
TTC39C-202ENST00000317571 FAM136AQ96C01 138 aa20.8■□□□□ 0.92
TTC39C-202ENST00000317571 UBE2OQ9C0C9 1292 aaKnown RBP20.8■□□□□ 0.92
TTC39C-202ENST00000317571 ABT1Q9ULW3 272 aaKnown RBP20.8■□□□□ 0.92
TTC39C-202ENST00000317571 CPB1P15086 417 aa20.79■□□□□ 0.92
TTC39C-202ENST00000317571 ITKQ08881 620 aa20.79■□□□□ 0.92
TTC39C-202ENST00000317571 CUL3Q13618 768 aa20.79■□□□□ 0.92
TTC39C-202ENST00000317571 LDB1Q86U70 411 aaPredicted RBP20.79■□□□□ 0.92
TTC39C-202ENST00000317571 DEFB107AQ8IZN7 70 aa20.79■□□□□ 0.92
TTC39C-202ENST00000317571 ACTRT2Q8TDY3 377 aa20.79■□□□□ 0.92
TTC39C-202ENST00000317571 FBXO32Q969P5 355 aa20.79■□□□□ 0.92
TTC39C-202ENST00000317571 FNIP2Q9P278 1114 aa20.79■□□□□ 0.92
TTC39C-202ENST00000317571 CDH22Q9UJ99 828 aa20.79■□□□□ 0.92
TTC39C-202ENST00000317571 G3BP2Q9UN86 482 aaKnown RBP20.79■□□□□ 0.92
TTC39C-202ENST00000317571 KCTD3Q9Y597 815 aa20.79■□□□□ 0.92
TTC39C-202ENST00000317571 LINGO3P0C6S8 592 aa20.79■□□□□ 0.92
TTC39C-202ENST00000317571 SERPINB5P36952 375 aa20.79■□□□□ 0.92
TTC39C-202ENST00000317571 MAGEA11P43364 429 aa20.79■□□□□ 0.92
TTC39C-202ENST00000317571 SERPINH1P50454 418 aaKnown RBP20.79■□□□□ 0.92
TTC39C-202ENST00000317571 TAF10Q12962 218 aa20.79■□□□□ 0.92
TTC39C-202ENST00000317571 CCNIQ14094 377 aa20.79■□□□□ 0.92
TTC39C-202ENST00000317571 MARC1Q5VT66 337 aa20.79■□□□□ 0.92
TTC39C-202ENST00000317571 SEL1L3Q68CR1 1132 aa20.79■□□□□ 0.92
TTC39C-202ENST00000317571 LCA5Q86VQ0 697 aa20.79■□□□□ 0.92
TTC39C-202ENST00000317571 TEX26Q8N6G2 289 aa20.79■□□□□ 0.92
TTC39C-202ENST00000317571 TADA1Q96BN2 335 aa20.79■□□□□ 0.92
TTC39C-202ENST00000317571 CMTM5Q96DZ9 223 aa20.79■□□□□ 0.92
TTC39C-202ENST00000317571 TSNARE1Q96NA8 513 aa20.79■□□□□ 0.92
TTC39C-202ENST00000317571 ZNF385DQ9H6B1 395 aa20.79■□□□□ 0.92
TTC39C-202ENST00000317571 MARCH5Q9NX47 278 aa20.79■□□□□ 0.92
TTC39C-202ENST00000317571 MUSKO15146 869 aa20.78■□□□□ 0.92
TTC39C-202ENST00000317571 ACVRL1P37023 503 aa20.78■□□□□ 0.92
TTC39C-202ENST00000317571 RENBPP51606 427 aa20.78■□□□□ 0.92
TTC39C-202ENST00000317571 GPNMBQ14956 572 aa20.78■□□□□ 0.92
TTC39C-202ENST00000317571 NADSYN1Q6IA69 706 aa20.78■□□□□ 0.92
TTC39C-202ENST00000317571 RNF180Q86T96 592 aa20.78■□□□□ 0.92
TTC39C-202ENST00000317571 SREK1Q8WXA9 508 aaKnown RBP20.78■□□□□ 0.92
TTC39C-202ENST00000317571 PPP1R2P1Q96PQ5 205 aa20.78■□□□□ 0.92
TTC39C-202ENST00000317571 PRKD2Q9BZL6 878 aa20.78■□□□□ 0.92
TTC39C-202ENST00000317571 SSX2IPQ9Y2D8 614 aa20.78■□□□□ 0.92
TTC39C-202ENST00000317571 OR51F1A6NGY5 319 aa20.78■□□□□ 0.92
TTC39C-202ENST00000317571 IGLV3-27P01718 113 aa20.78■□□□□ 0.92
TTC39C-202ENST00000317571 ATXN1LP0C7T5 689 aaKnown RBP20.78■□□□□ 0.92
TTC39C-202ENST00000317571 SLC2A3P11169 496 aa20.78■□□□□ 0.92
TTC39C-202ENST00000317571 ARSAP15289 507 aa20.78■□□□□ 0.92
TTC39C-202ENST00000317571 PAMP19021 973 aa20.78■□□□□ 0.92
TTC39C-202ENST00000317571 YWHAQP27348 245 aa20.78■□□□□ 0.92
TTC39C-202ENST00000317571 CRABP2P29373 138 aa20.78■□□□□ 0.92
TTC39C-202ENST00000317571 ETFBP38117 255 aa20.78■□□□□ 0.92
TTC39C-202ENST00000317571 PBX3P40426 434 aa20.78■□□□□ 0.92
TTC39C-202ENST00000317571 TRIP4Q15650 581 aaPredicted RBP20.78■□□□□ 0.92
TTC39C-202ENST00000317571 METTL21CQ5VZV1 264 aa20.78■□□□□ 0.92
TTC39C-202ENST00000317571 RPS27LQ71UM5 84 aaKnown RBP20.78■□□□□ 0.92
TTC39C-202ENST00000317571 HPS6Q86YV9 775 aa20.78■□□□□ 0.92
TTC39C-202ENST00000317571 KDM1BQ8NB78 822 aa20.78■□□□□ 0.92
TTC39C-202ENST00000317571 CCDC124Q96CT7 223 aaKnown RBP20.78■□□□□ 0.92
TTC39C-202ENST00000317571 MRPL46Q9H2W6 279 aaKnown RBP20.78■□□□□ 0.92
TTC39C-202ENST00000317571 SP110Q9HB58 689 aa20.78■□□□□ 0.92
TTC39C-202ENST00000317571 SLC24A3Q9HC58 644 aa20.78■□□□□ 0.92
TTC39C-202ENST00000317571 TNFRSF12AQ9NP84 129 aa20.78■□□□□ 0.92
TTC39C-202ENST00000317571 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.78■□□□□ 0.92
TTC39C-202ENST00000317571 MARCH4Q9P2E8 410 aaPredicted RBP20.78■□□□□ 0.92
TTC39C-202ENST00000317571 HEATR9A2RTY3 570 aa20.77■□□□□ 0.92
TTC39C-202ENST00000317571 DPPA5A6NC42 116 aa20.77■□□□□ 0.92
TTC39C-202ENST00000317571 SYN3O14994 580 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms