RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 MYO1AQ9UBC5 1043 aa17.97■□□□□ 0.47
TPM1-203ENST00000317516 ITM2BQ9Y287 266 aa17.97■□□□□ 0.47
TPM1-203ENST00000317516 AKAP13Q12802 2813 aa17.97■□□□□ 0.47
TPM1-203ENST00000317516 A0A1W2PQJ5 194 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 J3KR12 359 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 TOR1BO14657 336 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 SCAMP1O15126 338 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 PALMO75781 387 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 CSF2P04141 144 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 TIMP2P16035 220 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 ERCC2P18074 760 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 PCK1P35558 622 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 PAPOLAP51003 745 aaKnown RBP17.96■□□□□ 0.47
TPM1-203ENST00000317516 DUSP3P51452 185 aaPredicted RBP17.96■□□□□ 0.47
TPM1-203ENST00000317516 THOP1P52888 689 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 CYP4F3Q08477 520 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 CAMK2BQ13554 666 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 PDE1CQ14123 709 aaPredicted RBP17.96■□□□□ 0.47
TPM1-203ENST00000317516 FZD2Q14332 565 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 CA9Q16790 459 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 BOLA3Q53S33 107 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 E4F1Q66K89 784 aaPredicted RBP17.96■□□□□ 0.47
TPM1-203ENST00000317516 LUZP1Q86V48 1076 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 MARCH9Q86YJ5 346 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 NETO2Q8NC67 525 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 BTN2A2Q8WVV5 523 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 CENPTQ96BT3 561 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 TUBGCP5Q96RT8 1024 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 SUV39H2Q9H5I1 410 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 GPR27Q9NS67 375 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 NLGN3Q9NZ94 848 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 LHX3Q9UBR4 397 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 GGT7Q9UJ14 662 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 TMEM131Q92545 1883 aa17.96■□□□□ 0.47
TPM1-203ENST00000317516 NYNRINQ9P2P1 1898 aaKnown RBP17.95■□□□□ 0.46
TPM1-203ENST00000317516 FFAR2O15552 330 aa17.95■□□□□ 0.46
TPM1-203ENST00000317516 MMP20O60882 483 aa17.95■□□□□ 0.46
TPM1-203ENST00000317516 NME1P15531 152 aaKnown RBP17.95■□□□□ 0.46
TPM1-203ENST00000317516 CSNK1DP48730 415 aa17.95■□□□□ 0.46
TPM1-203ENST00000317516 PFN3P60673 137 aa17.95■□□□□ 0.46
TPM1-203ENST00000317516 YPEL5P62699 121 aa17.95■□□□□ 0.46
TPM1-203ENST00000317516 RFTN1Q14699 578 aaPredicted RBP17.95■□□□□ 0.46
TPM1-203ENST00000317516 ZNF542PQ5EBM4 170 aa17.95■□□□□ 0.46
TPM1-203ENST00000317516 HES3Q5TGS1 186 aa17.95■□□□□ 0.46
TPM1-203ENST00000317516 ERAP2Q6P179 960 aa17.95■□□□□ 0.46
TPM1-203ENST00000317516 BRAT1Q6PJG6 821 aa17.95■□□□□ 0.46
TPM1-203ENST00000317516 CACTIN-AS1Q8N1I8 211 aa17.95■□□□□ 0.46
TPM1-203ENST00000317516 VOPP1Q96AW1 172 aa17.95■□□□□ 0.46
TPM1-203ENST00000317516 EXOC2Q96KP1 924 aa17.95■□□□□ 0.46
TPM1-203ENST00000317516 PEBP4Q96S96 227 aa17.95■□□□□ 0.46
TPM1-203ENST00000317516 KCTD15Q96SI1 283 aaPredicted RBP17.95■□□□□ 0.46
TPM1-203ENST00000317516 SP110Q9HB58 689 aa17.95■□□□□ 0.46
TPM1-203ENST00000317516 PDFQ9HBH1 243 aa17.95■□□□□ 0.46
TPM1-203ENST00000317516 USP29Q9HBJ7 922 aa17.95■□□□□ 0.46
TPM1-203ENST00000317516 CSNK1G3Q9Y6M4 447 aa17.95■□□□□ 0.46
TPM1-203ENST00000317516 COL5A1P20908 1838 aaPredicted RBP17.95■□□□□ 0.46
TPM1-203ENST00000317516 KNTC1P50748 2209 aa17.94■□□□□ 0.46
TPM1-203ENST00000317516 H3BRJ5 948 aa17.94■□□□□ 0.46
TPM1-203ENST00000317516 DFFAO00273 331 aa17.94■□□□□ 0.46
TPM1-203ENST00000317516 RIOK3O14730 519 aaKnown RBP17.94■□□□□ 0.46
TPM1-203ENST00000317516 INSIG1O15503 277 aa17.94■□□□□ 0.46
TPM1-203ENST00000317516 LRCH4O75427 683 aa17.94■□□□□ 0.46
TPM1-203ENST00000317516 SERPING1P05155 500 aa17.94■□□□□ 0.46
TPM1-203ENST00000317516 CKMT1AP12532 417 aa17.94■□□□□ 0.46
TPM1-203ENST00000317516 JUNDP17535 347 aa17.94■□□□□ 0.46
TPM1-203ENST00000317516 ARL4AP40617 200 aa17.94■□□□□ 0.46
TPM1-203ENST00000317516 ZBED6P86452 979 aa17.94■□□□□ 0.46
TPM1-203ENST00000317516 NSUN2Q08J23 767 aaKnown RBP eCLIP17.94■□□□□ 0.46
TPM1-203ENST00000317516 TARDBPQ13148 414 aaKnown RBP eCLIP17.94■□□□□ 0.46
TPM1-203ENST00000317516 PIGHQ14442 188 aaPredicted RBP17.94■□□□□ 0.46
TPM1-203ENST00000317516 UGP2Q16851 508 aa17.94■□□□□ 0.46
TPM1-203ENST00000317516 TMEM52BQ4KMG9 183 aa17.94■□□□□ 0.46
TPM1-203ENST00000317516 FAM181AQ8N9Y4 354 aa17.94■□□□□ 0.46
TPM1-203ENST00000317516 CINPQ9BW66 212 aaPredicted RBP17.94■□□□□ 0.46
TPM1-203ENST00000317516 TRIM7Q9C029 511 aa17.94■□□□□ 0.46
TPM1-203ENST00000317516 ATP13A3Q9H7F0 1226 aa17.94■□□□□ 0.46
TPM1-203ENST00000317516 NCKIPSDQ9NZQ3 722 aa17.94■□□□□ 0.46
TPM1-203ENST00000317516 LUC7L2Q9Y383 392 aaKnown RBP17.94■□□□□ 0.46
TPM1-203ENST00000317516 SPINT1O43278 529 aa17.93■□□□□ 0.46
TPM1-203ENST00000317516 PIGNO95427 931 aa17.93■□□□□ 0.46
TPM1-203ENST00000317516 SERPINA4P29622 427 aa17.93■□□□□ 0.46
TPM1-203ENST00000317516 RENBPP51606 427 aa17.93■□□□□ 0.46
TPM1-203ENST00000317516 POLR2LP62875 67 aaKnown RBP17.93■□□□□ 0.46
TPM1-203ENST00000317516 IL10RBQ08334 325 aa17.93■□□□□ 0.46
TPM1-203ENST00000317516 NFKBIBQ15653 356 aa17.93■□□□□ 0.46
TPM1-203ENST00000317516 LRRC73Q5JTD7 316 aa17.93■□□□□ 0.46
TPM1-203ENST00000317516 AFMIDQ63HM1 303 aa17.93■□□□□ 0.46
TPM1-203ENST00000317516 SRLQ86TD4 932 aa17.93■□□□□ 0.46
TPM1-203ENST00000317516 PAF1Q8N7H5 531 aa17.93■□□□□ 0.46
TPM1-203ENST00000317516 CPLX3Q8WVH0 158 aa17.93■□□□□ 0.46
TPM1-203ENST00000317516 RFFLQ8WZ73 363 aa17.93■□□□□ 0.46
TPM1-203ENST00000317516 NXPE2Q96DL1 559 aa17.93■□□□□ 0.46
TPM1-203ENST00000317516 WRAP53Q9BUR4 548 aaKnown RBP17.93■□□□□ 0.46
TPM1-203ENST00000317516 CWC15Q9P013 229 aaKnown RBP17.93■□□□□ 0.46
TPM1-203ENST00000317516 SPASTQ9UBP0 616 aa17.93■□□□□ 0.46
TPM1-203ENST00000317516 CAPN11Q9UMQ6 739 aa17.93■□□□□ 0.46
TPM1-203ENST00000317516 CLCA2Q9UQC9 943 aa17.93■□□□□ 0.46
TPM1-203ENST00000317516 GOLGA4Q13439 2230 aaKnown RBP17.92■□□□□ 0.46
TPM1-203ENST00000317516 TSPAN11A1L157 253 aa17.92■□□□□ 0.46
TPM1-203ENST00000317516 TMEM110-MUSTN1A8MSY1 372 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms