RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 PELI3Q8N2H9 469 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 CYGBQ8WWM9 190 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 TWNKQ96RR1 684 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 CYP2S1Q96SQ9 504 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 KIFC1Q9BW19 673 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 MEAF6Q9HAF1 191 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 CASS4Q9NQ75 786 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.82□□□□□ -1.64
PTPN13-201ENST00000316707 SUN2Q9UH99 717 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 ROBO1Q9Y6N7 1651 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 KCNU1A8MYU2 1149 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 VWA5AO00534 786 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 ABCB7O75027 752 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 SUPT7LO94864 414 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 F9P00740 461 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 TPD52P55327 224 aaPredicted RBP4.82□□□□□ -1.64
PTPN13-201ENST00000316707 BST2Q10589 180 aaKnown RBP4.82□□□□□ -1.64
PTPN13-201ENST00000316707 TRIM32Q13049 653 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 FGD3Q5JSP0 725 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 RBM48Q5RL73 367 aaKnown RBP4.82□□□□□ -1.64
PTPN13-201ENST00000316707 AGAP7PQ5VUJ5 663 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 ANKRD26P1Q6NSI1 321 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 NEPROQ6NW34 567 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 PAOXQ6QHF9 649 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 WNK4Q96J92 1243 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 MYRFLQ96LU7 910 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 LGMNQ99538 433 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 TRIM54Q9BYV2 358 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 ZFYVE28Q9HCC9 887 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 PTPRHQ9HD43 1115 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 SNX9Q9Y5X1 595 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 SLC22A1O15245 554 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 DYNC1LI2O43237 492 aaPredicted RBP4.82□□□□□ -1.64
PTPN13-201ENST00000316707 TIPRLO75663 272 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 ANXA9O76027 345 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 ATE1O95260 518 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 AMHP03971 560 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 RFC2P35250 354 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 BCAT1P54687 386 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 DLG2Q15700 870 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 NCBP2-AS2Q69YL0 99 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 RAB44Q7Z6P3 723 aaPredicted RBP4.82□□□□□ -1.64
PTPN13-201ENST00000316707 CUZD1Q86UP6 607 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 ITIH5Q86UX2 942 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 NTAN1Q96AB6 310 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 ZNF512Q96ME7 567 aaPredicted RBP4.82□□□□□ -1.64
PTPN13-201ENST00000316707 INTS10Q9NVR2 710 aaKnown RBP4.82□□□□□ -1.64
PTPN13-201ENST00000316707 SIX4Q9UIU6 781 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 AAR2Q9Y312 384 aaKnown RBP4.82□□□□□ -1.64
PTPN13-201ENST00000316707 PRORSD1PA6NEY8 169 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 TNPO2O14787 897 aaKnown RBP4.82□□□□□ -1.64
PTPN13-201ENST00000316707 IPO13O94829 963 aaKnown RBP4.82□□□□□ -1.64
PTPN13-201ENST00000316707 MATN4O95460 622 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 PABPC1P11940 636 aaKnown RBP4.82□□□□□ -1.64
PTPN13-201ENST00000316707 GSTM2P28161 218 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 TNFSF9P41273 254 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 CCT8P50990 548 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 IL18R1Q13478 541 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 GRM3Q14832 879 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 PAFAH1B3Q15102 231 aaKnown RBP4.82□□□□□ -1.64
PTPN13-201ENST00000316707 DCAF6Q58WW2 860 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 NANOGP8Q6NSW7 305 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 ELMSAN1Q6PJG2 1045 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 NAPRTQ6XQN6 538 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 TMCO5AQ8N6Q1 288 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 GIPC2Q8TF65 315 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 YME1L1Q96TA2 773 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 PCDHAC1Q9H158 963 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 ZNF277Q9NRM2 450 aaPredicted RBP4.82□□□□□ -1.64
PTPN13-201ENST00000316707 ABCD2Q9UBJ2 740 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 TMEM98Q9Y2Y6 226 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 IFT52Q9Y366 437 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 SHANK3Q9BYB0 1731 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 RGS20O76081 388 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 LBPP18428 481 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 MATKP42679 507 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 NDST1P52848 882 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 RAD23AP54725 363 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 GALNT2Q10471 571 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 ITGA7Q13683 1181 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 CYP51A1Q16850 503 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 ARL13BQ3SXY8 428 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 REP15Q6BDI9 236 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 STYK1Q6J9G0 422 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 DDIASQ8IXT1 998 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 C8orf59Q8N0T1 100 aaPredicted RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 PLD6Q8N2A8 252 aaKnown RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 CHST13Q8NET6 341 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 ABHD11Q8NFV4 315 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 OR52K1Q8NGK4 314 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 RNF139Q8WU17 664 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 NGLY1Q96IV0 654 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 CPB2Q96IY4 423 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 SLX1AQ9BQ83 275 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 YIPF2Q9BWQ6 316 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 HAPLN2Q9GZV7 340 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 CDT1Q9H211 546 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 CCNB1IP1Q9NPC3 277 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 MAGEL2Q9UJ55 1249 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 RUVBL2Q9Y230 463 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms