RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 LTN1O94822 1766 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 SLIT3O75094 1523 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 SPATA31A1Q5TZJ5 1347 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 P4HA2O15460 535 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 CCNT1O60563 726 aaKnown RBP4.28□□□□□ -1.72
SMCO3-201ENST00000316048 PGM3O95394 542 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 GALTP07902 379 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 SOX2P48431 317 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 TEFQ10587 303 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 RILPL1Q5EBL4 403 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 KLHL24Q6TFL4 600 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 SERPINA13PQ6UXR4 307 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 HSPH1Q92598 858 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 TBC1D5Q92609 795 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 NSUN4Q96CB9 384 aaKnown RBP4.28□□□□□ -1.72
SMCO3-201ENST00000316048 DAZAP1Q96EP5 407 aaKnown RBP4.28□□□□□ -1.72
SMCO3-201ENST00000316048 HIC2Q96JB3 615 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 TM2D2Q9BX73 214 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 TRIM2Q9C040 744 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 POLR1BQ9H9Y6 1135 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 CYP4F11Q9HBI6 524 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 PLSCR4Q9NRQ2 329 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 SNTG1Q9NSN8 517 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 GAR1Q9NY12 217 aaKnown RBP4.28□□□□□ -1.72
SMCO3-201ENST00000316048 TFCP2L1Q9NZI6 479 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 MPP6Q9NZW5 540 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 LIMA1Q9UHB6 759 aaKnown RBP4.28□□□□□ -1.72
SMCO3-201ENST00000316048 CNOT11Q9UKZ1 510 aaKnown RBP4.28□□□□□ -1.72
SMCO3-201ENST00000316048 DTX4Q9Y2E6 619 aa4.28□□□□□ -1.72
SMCO3-201ENST00000316048 PHRF1Q9P1Y6 1649 aaKnown RBP4.27□□□□□ -1.73
SMCO3-201ENST00000316048 ABCC4O15439 1325 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 FAM237BA0A1B0GVD1 139 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 VILLO15195 856 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 STARD3NLO95772 234 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 BSGP35613 385 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 SNX16P57768 344 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 ABHD18Q0P651 414 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 WTAPQ15007 396 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 CFAP58Q5T655 872 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 ZNF530Q6P9A1 599 aaPredicted RBP4.27□□□□□ -1.73
SMCO3-201ENST00000316048 TMCO3Q6UWJ1 677 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 ZNF627Q7L945 461 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 NEK8Q86SG6 692 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 CPXM2Q8N436 756 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 FRMD1Q8N878 549 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 NEU4Q8WWR8 484 aaPredicted RBP4.27□□□□□ -1.73
SMCO3-201ENST00000316048 KAT2AQ92830 837 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 LRRC59Q96AG4 307 aaKnown RBP4.27□□□□□ -1.73
SMCO3-201ENST00000316048 INTS12Q96CB8 462 aaKnown RBP4.27□□□□□ -1.73
SMCO3-201ENST00000316048 FAM120BQ96EK7 910 aaKnown RBP4.27□□□□□ -1.73
SMCO3-201ENST00000316048 NAP1L5Q96NT1 182 aaPredicted RBP4.27□□□□□ -1.73
SMCO3-201ENST00000316048 FCRL5Q96RD9 977 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 CADM1Q9BY67 442 aaKnown RBP4.27□□□□□ -1.73
SMCO3-201ENST00000316048 SERGEFQ9UGK8 458 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 ADAM18Q9Y3Q7 739 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 TRPM3Q9HCF6 1732 aaPredicted RBP4.27□□□□□ -1.73
SMCO3-201ENST00000316048 A0A1W2PQF6 199 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 B4DLN1 442 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 SMIM22K7EJ46 135 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 DNTTP04053 509 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 HOXB7P09629 217 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 TTKP33981 857 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 BLOC1S1P78537 153 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 EFEMP1Q12805 493 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 ACVR2BQ13705 512 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 BECN1Q14457 450 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 KRT24Q2M2I5 525 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 TTLL5Q6EMB2 1281 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 Q6ZPA2 131 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 ZNF804AQ7Z570 1209 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 RPAP2Q8IXW5 612 aaPredicted RBP4.27□□□□□ -1.73
SMCO3-201ENST00000316048 TMEM116Q8NCL8 245 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 DNAAF1Q8NEP3 725 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 SNRNP27Q8WVK2 155 aaKnown RBP4.27□□□□□ -1.73
SMCO3-201ENST00000316048 SAAL1Q96ER3 474 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 CCDC17Q96LX7 622 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 COQ10AQ96MF6 247 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 UPF2Q9HAU5 1272 aaKnown RBP4.27□□□□□ -1.73
SMCO3-201ENST00000316048 HCFC1R1Q9NWW0 138 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 ASB6Q9NWX5 421 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 SLCO3A1Q9UIG8 710 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 INTS6Q9UL03 887 aaKnown RBP4.27□□□□□ -1.73
SMCO3-201ENST00000316048 ICKQ9UPZ9 632 aa4.27□□□□□ -1.73
SMCO3-201ENST00000316048 C17orf113A0A1B0GUU1 675 aa4.26□□□□□ -1.73
SMCO3-201ENST00000316048 CCDC151A5D8V7 595 aa4.26□□□□□ -1.73
SMCO3-201ENST00000316048 LIPT2A6NK58 231 aa4.26□□□□□ -1.73
SMCO3-201ENST00000316048 RNMTO43148 476 aaKnown RBP4.26□□□□□ -1.73
SMCO3-201ENST00000316048 LIASO43766 372 aa4.26□□□□□ -1.73
SMCO3-201ENST00000316048 NARSO43776 548 aaKnown RBP4.26□□□□□ -1.73
SMCO3-201ENST00000316048 STRNO43815 780 aa4.26□□□□□ -1.73
SMCO3-201ENST00000316048 ENO1P06733 434 aaKnown RBP4.26□□□□□ -1.73
SMCO3-201ENST00000316048 PPARGP37231 505 aaPredicted RBP4.26□□□□□ -1.73
SMCO3-201ENST00000316048 CLK3P49761 638 aaKnown RBP4.26□□□□□ -1.73
SMCO3-201ENST00000316048 RPL7AP62424 266 aaKnown RBP4.26□□□□□ -1.73
SMCO3-201ENST00000316048 YPEL5P62699 121 aa4.26□□□□□ -1.73
SMCO3-201ENST00000316048 RPE65Q16518 533 aa4.26□□□□□ -1.73
SMCO3-201ENST00000316048 ME3Q16798 604 aa4.26□□□□□ -1.73
SMCO3-201ENST00000316048 ALG11Q2TAA5 492 aa4.26□□□□□ -1.73
SMCO3-201ENST00000316048 DUSP28Q4G0W2 176 aa4.26□□□□□ -1.73
SMCO3-201ENST00000316048 MFSD4BQ5TF39 518 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms