RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 EGFL7Q9UHF1 273 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 ALKQ9UM73 1620 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 FSCN2O14926 492 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 FGF10O15520 208 aaPredicted RBP13.78□□□□□ -0.2
CLCN6-201ENST00000312413 SEMA3DO95025 777 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 INSRRP14616 1297 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 HOXB6P17509 224 aaKnown RBP13.78□□□□□ -0.2
CLCN6-201ENST00000312413 CCR4P51679 360 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 TSC22D1Q15714 1073 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 MTX3Q5HYI7 312 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 NIPA1Q7RTP0 329 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 C10orf107Q8IVU9 208 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 CCDC185Q8N715 623 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 UBE2E3Q969T4 207 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 XPR1Q9UBH6 696 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 COQ6Q9Y2Z9 468 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 CLTCL1P53675 1640 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 CLUHO75153 1309 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 LMTK2Q8IWU2 1503 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 H3BRB1 525 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 LSM1O15116 133 aaKnown RBP13.78□□□□□ -0.2
CLCN6-201ENST00000312413 PGRMC2O15173 223 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 TGFB3P10600 412 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 CYP2A6P11509 494 aaPredicted RBP13.78□□□□□ -0.2
CLCN6-201ENST00000312413 ZNF24P17028 368 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 PRKAG1P54619 331 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 AMPD2Q01433 879 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 FSCN1Q16658 493 aaKnown RBP13.78□□□□□ -0.2
CLCN6-201ENST00000312413 GPRIN3Q6ZVF9 776 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 KCNK18Q7Z418 384 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 LINC00116Q8NCU8 138 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 NFKBIZQ9BYH8 718 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 TUT1Q9H6E5 874 aaKnown RBP13.78□□□□□ -0.2
CLCN6-201ENST00000312413 MAGEL2Q9UJ55 1249 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 PSME2Q9UL46 239 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 SLC9A8Q9Y2E8 581 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 IRAK3Q9Y616 596 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 WWP2O00308 870 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 SLC28A1O00337 649 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 LYPLA1O75608 230 aaPredicted RBP13.78□□□□□ -0.2
CLCN6-201ENST00000312413 S100A6P06703 90 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 LACTB2Q53H82 288 aaPredicted RBP13.78□□□□□ -0.2
CLCN6-201ENST00000312413 APTXQ7Z2E3 356 aaKnown RBP13.78□□□□□ -0.2
CLCN6-201ENST00000312413 CLNKQ7Z7G1 428 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 GPR180Q86V85 440 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 TNS4Q8IZW8 715 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 CDYL2Q8N8U2 506 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 DNERQ8NFT8 737 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 HTRA1Q92743 480 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.78□□□□□ -0.2
CLCN6-201ENST00000312413 HACL1Q9UJ83 578 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 ZNF221Q9UK13 617 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 RIMBP3CA6NJZ7 1639 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 RIMBP3BA6NNM3 1639 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 RIMBP3Q9UFD9 1639 aa13.78□□□□□ -0.2
CLCN6-201ENST00000312413 A0A088AWK7 358 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 CAPN8A6NHC0 703 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.77□□□□□ -0.2
CLCN6-201ENST00000312413 ANKRD63C9JTQ0 380 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 H3BNX3 289 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 AZIN1O14977 448 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 ZNF10P21506 573 aaPredicted RBP13.77□□□□□ -0.2
CLCN6-201ENST00000312413 CYP2C18P33260 490 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 ZNF157P51786 506 aaPredicted RBP13.77□□□□□ -0.2
CLCN6-201ENST00000312413 ARF5P84085 180 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 TAF13Q15543 124 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 ATP13A4Q4VNC1 1196 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 FAM71AQ8IYT1 594 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 CLYBLQ8N0X4 340 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 PWWP2AQ96N64 755 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 OR12D3Q9UGF7 316 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 SLC12A4Q9UP95 1085 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 SQORQ9Y6N5 450 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 CDC42BPBQ9Y5S2 1711 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 ATP6AP2A0A1C7CYW4 349 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 TCRBV9S1A1TA0A576 114 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 G3V2T6 193 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 TRAFD1O14545 582 aaPredicted RBP13.77□□□□□ -0.2
CLCN6-201ENST00000312413 FFAR3O14843 346 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 GPR42O15529 346 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 OR10H3O60404 316 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 ATP6AP2O75787 350 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 LRIG2O94898 1065 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 TRUB2O95900 331 aaKnown RBP13.77□□□□□ -0.2
CLCN6-201ENST00000312413 WEE1P30291 646 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 RPL3P39023 403 aaKnown RBP13.77□□□□□ -0.2
CLCN6-201ENST00000312413 HYIQ5T013 277 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 FAM131AQ6UXB0 335 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 SLC30A10Q6XR72 485 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 CCDC36Q8IYA8 594 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 MLPHQ9BV36 600 aaPredicted RBP13.77□□□□□ -0.2
CLCN6-201ENST00000312413 ULBP1Q9BZM6 244 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 TMEM165Q9HC07 324 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 SNX15Q9NRS6 342 aa13.77□□□□□ -0.2
CLCN6-201ENST00000312413 A0A1W2PPM1 405 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 GSAPA4D1B5 854 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 EPHB6O15197 1021 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 CABYRO75952 493 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 SPIBQ01892 262 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 TYSND1Q2T9J0 566 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms