RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 RAB2BQ8WUD1 216 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 PPP1R13LQ8WUF5 828 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 PSD2Q9BQI7 771 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 CNPY3Q9BT09 278 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 IL1RL2Q9HB29 575 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 HMG20AQ9NP66 347 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 ANKRD34BA5PLL1 514 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 NAT1P18440 290 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 ELK4P28324 431 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 IFITM3Q01628 133 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 NDUFA5Q16718 116 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 ZNF699Q32M78 642 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 INAVAQ3KP66 663 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 MTERF2Q49AM1 385 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 RNF19BQ6ZMZ0 732 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 MCPH1Q8NEM0 835 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 SHCBP1Q8NEM2 672 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 ZNF641Q96N77 438 aaPredicted RBP18.19■□□□□ 0.5
SPSB4-201ENST00000310546 ADAMTS10Q9H324 1103 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 KLQ9UEF7 1012 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 HTTP42858 3142 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 LAMA2P24043 3122 aaKnown RBP18.19■□□□□ 0.5
SPSB4-201ENST00000310546 KIAA1217Q5T5P2 1943 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 PHGDHO43175 533 aaKnown RBP18.19■□□□□ 0.5
SPSB4-201ENST00000310546 H2AFYO75367 372 aaKnown RBP18.19■□□□□ 0.5
SPSB4-201ENST00000310546 DGAT1O75907 488 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 POLBP06746 335 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 OLIG2Q13516 323 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 SEMA5AQ13591 1074 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 FASTKQ14296 549 aaKnown RBP18.19■□□□□ 0.5
SPSB4-201ENST00000310546 SAMD4BQ5PRF9 694 aaKnown RBP18.19■□□□□ 0.5
SPSB4-201ENST00000310546 INTS11Q5TA45 600 aaKnown RBP18.19■□□□□ 0.5
SPSB4-201ENST00000310546 AGAP7PQ5VUJ5 663 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 VSIG10LQ86VR7 867 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 UBA3Q8TBC4 463 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 FEM1CQ96JP0 617 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 RBBP8Q99708 897 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 LHPPQ9H008 270 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 ACAD9Q9H845 621 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 VTI1BQ9UEU0 232 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 CHEK2O96017 543 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 PPIL2Q13356 520 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 PRPSAP1Q14558 356 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 SPCS2Q15005 226 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 OR6B2Q6IFH4 312 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 CLIP4Q8N3C7 705 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 USP33Q8TEY7 942 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 SNX9Q9Y5X1 595 aa18.19■□□□□ 0.5
SPSB4-201ENST00000310546 DHRS12A0PJE2 317 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 M0QYV0 167 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 MRASO14807 208 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 SYNCRIPO60506 623 aaKnown RBP18.18■□□□□ 0.5
SPSB4-201ENST00000310546 FASP25445 335 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 SOX11P35716 441 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 PSMD8P48556 350 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 IQSEC1Q6DN90 963 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 PACRGLQ8N7B6 248 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 PDZD8Q8NEN9 1154 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 CXorf38Q8TB03 319 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 NRBF2Q96F24 287 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 C12orf42Q96LP6 360 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 TUBA1CQ9BQE3 449 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 C9orf16Q9BUW7 83 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 MAGEB5Q9BZ81 275 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 ARMC1Q9NVT9 282 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 CD300AQ9UGN4 299 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 SLC39A10Q9ULF5 831 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 ADAMTS5Q9UNA0 930 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 IFT52Q9Y366 437 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 TIMM22Q9Y584 194 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 PCDHA10Q9Y5I2 948 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 DOCK5Q9H7D0 1870 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 MED7O43513 233 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 SNAP29O95721 258 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 CYP2F1P24903 491 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 SFNP31947 248 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 GJA5P36382 358 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 NR4A2P43354 598 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 PRKAA2P54646 552 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 SLFN12LQ6IEE8 588 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 PDPRQ8NCN5 879 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 OR9I1Q8NGQ6 314 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 NSUN6Q8TEA1 469 aaKnown RBP18.18■□□□□ 0.5
SPSB4-201ENST00000310546 FCRL3Q96P31 734 aaPredicted RBP18.18■□□□□ 0.5
SPSB4-201ENST00000310546 LHX5Q9H2C1 402 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 RRAGCQ9HB90 399 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 GTSE1Q9NYZ3 720 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 ANKMY1Q9P2S6 941 aa18.18■□□□□ 0.5
SPSB4-201ENST00000310546 ALOX5P09917 674 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 HSPA1AP0DMV8 641 aaKnown RBP18.17■□□□□ 0.5
SPSB4-201ENST00000310546 HSPA1BP0DMV9 641 aaKnown RBP18.17■□□□□ 0.5
SPSB4-201ENST00000310546 LRPAP1P30533 357 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 CAPGP40121 348 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 HLCSP50747 726 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 LIMK2P53671 638 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 MAPRE1Q15691 268 aaKnown RBP18.17■□□□□ 0.5
SPSB4-201ENST00000310546 ANKRD13BQ86YJ7 626 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 CMTR2Q8IYT2 770 aaKnown RBP18.17■□□□□ 0.5
SPSB4-201ENST00000310546 ANKRD13AQ8IZ07 590 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 LSMEM2Q8N112 164 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms