RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 PTAR1Q7Z6K3 402 aaPredicted RBP8.26□□□□□ -1.09
VPS41-202ENST00000310301 HASPINQ8TF76 798 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 TOX2Q96NM4 488 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 CGRRF1Q99675 332 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 OSBPL11Q9BXB4 747 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 TRPC4Q9UBN4 977 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 PMF1-BGLAPU3KQ54 211 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 CYP3A7-CYP3A51PA0A087WV96 503 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 A0A096LPK6 155 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 DPPA5A6NC42 116 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 TIMP1P01033 207 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 PABPC1P11940 636 aaKnown RBP8.25□□□□□ -1.09
VPS41-202ENST00000310301 CYP3A7P24462 503 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 GP5P40197 560 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 NEK3P51956 506 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 PSMD4P55036 377 aaKnown RBP8.25□□□□□ -1.09
VPS41-202ENST00000310301 PTSQ03393 145 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 MAD2L1Q13257 205 aaPredicted RBP8.25□□□□□ -1.09
VPS41-202ENST00000310301 UBAP2LQ14157 1087 aaKnown RBP8.25□□□□□ -1.09
VPS41-202ENST00000310301 TTC23Q5W5X9 447 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 MFSD5Q6N075 450 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 TMEM132CQ8N3T6 1108 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 ACTL9Q8TC94 416 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 CPNE1Q99829 537 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 TCF25Q9BQ70 676 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 EPB41L4BQ9H329 900 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 ZNF224Q9NZL3 707 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 AKAP7Q9P0M2 348 aaPredicted RBP8.25□□□□□ -1.09
VPS41-202ENST00000310301 CCDC162PA2VCL2 907 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 A8MUI8 341 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 TMEM114B3SHH9 223 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 PITPNM1O00562 1244 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 HAT1O14929 419 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 TFECO14948 347 aaPredicted RBP8.25□□□□□ -1.09
VPS41-202ENST00000310301 CCNT2O60583 730 aaKnown RBP8.25□□□□□ -1.09
VPS41-202ENST00000310301 SNAP91O60641 907 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 GLP2RO95838 553 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 LTFP02788 710 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 ATF4P18848 351 aaPredicted RBP8.25□□□□□ -1.09
VPS41-202ENST00000310301 HALP42357 657 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 YWHAZP63104 245 aaKnown RBP8.25□□□□□ -1.09
VPS41-202ENST00000310301 CYP4F2P78329 520 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 TNK2Q07912 1038 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 CYP4F3Q08477 520 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 IL18R1Q13478 541 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 C16orf46Q6P387 395 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 SLCO6A1Q86UG4 719 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 CDK20Q8IZL9 346 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 PHOSPHO2Q8TCD6 241 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 MS4A4AQ96JQ5 239 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 REEP1Q9H902 201 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 SLC12A4Q9UP95 1085 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 PHF24Q9UPV7 400 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 ANKRD6Q9Y2G4 727 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 MRPS7Q9Y2R9 242 aaKnown RBP8.25□□□□□ -1.09
VPS41-202ENST00000310301 NDUFS2O75306 463 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 STX11O75558 287 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 F9P00740 461 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 SLURP2P0DP57 97 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 PRKAR1AP10644 381 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 MAGP20916 626 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 USP46P62068 366 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 NEK5Q6P3R8 708 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 KYAT3Q6YP21 454 aaKnown RBP8.25□□□□□ -1.09
VPS41-202ENST00000310301 SLFN11Q7Z7L1 901 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 NECTIN4Q96NY8 510 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 DDIT4Q9NX09 232 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 UBP1Q9NZI7 540 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 INVSQ9Y283 1065 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 GMPPBQ9Y5P6 360 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.25□□□□□ -1.09
VPS41-202ENST00000310301 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.25□□□□□ -1.09
VPS41-202ENST00000310301 MED24O75448 989 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 NADKO95544 446 aaPredicted RBP8.25□□□□□ -1.09
VPS41-202ENST00000310301 PGAM1P18669 254 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 RPL14P50914 215 aaKnown RBP8.25□□□□□ -1.09
VPS41-202ENST00000310301 NAA20P61599 178 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 PFKPQ01813 784 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 ZNF177Q13360 481 aaPredicted RBP8.25□□□□□ -1.09
VPS41-202ENST00000310301 CARTPTQ16568 116 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 PUS10Q3MIT2 529 aaKnown RBP8.25□□□□□ -1.09
VPS41-202ENST00000310301 KCNMB4Q86W47 210 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 MOSPD2Q8NHP6 518 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 MYDGFQ969H8 173 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 SYNDIG1Q9H7V2 258 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 PIH1D1Q9NWS0 290 aaKnown RBP8.25□□□□□ -1.09
VPS41-202ENST00000310301 SH3BP4Q9P0V3 963 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 SORCS3Q9UPU3 1222 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 TSPAN4O14817 238 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 ZBTB11O95625 1053 aaPredicted RBP8.25□□□□□ -1.09
VPS41-202ENST00000310301 MGAT1P26572 445 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 YWHAQP27348 245 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 IDH2P48735 452 aaKnown RBP8.25□□□□□ -1.09
VPS41-202ENST00000310301 CDK7P50613 346 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 CCR3P51677 355 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 AUHQ13825 339 aaKnown RBP8.25□□□□□ -1.09
VPS41-202ENST00000310301 CBWD2Q8IUF1 395 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 ULK2Q8IYT8 1036 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 MYLPFQ96A32 169 aa8.25□□□□□ -1.09
VPS41-202ENST00000310301 CORO1BQ9BR76 489 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms