RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 USP34Q70CQ2 3546 aa13.02□□□□□ -0.32
APTX-201ENST00000309615 GOLGA6L10A0A0M3HER8 536 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.02□□□□□ -0.33
APTX-201ENST00000309615 C16orf96A6NNT2 1141 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 H0Y858 1186 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 OPHN1O60890 802 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 ZNF217O75362 1048 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 GCATO75600 419 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 URI1O94763 535 aaPredicted RBP13.02□□□□□ -0.33
APTX-201ENST00000309615 MT-CYBP00156 380 aaPredicted RBP13.02□□□□□ -0.33
APTX-201ENST00000309615 IFNB1P01574 187 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 SERPINF2P08697 491 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 ETS1P14921 441 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 P2RY2P41231 377 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 PAFAH1B1P43034 410 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 SKOR1P84550 965 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 TRAF2Q12933 501 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 SRSF5Q13243 272 aaKnown RBP13.02□□□□□ -0.33
APTX-201ENST00000309615 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.02□□□□□ -0.33
APTX-201ENST00000309615 USP30Q70CQ3 517 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 PARS2Q7L3T8 475 aaKnown RBP13.02□□□□□ -0.33
APTX-201ENST00000309615 ZSWIM9Q86XI8 627 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 C12orf50Q8NA57 414 aaPredicted RBP13.02□□□□□ -0.33
APTX-201ENST00000309615 GLIS1Q8NBF1 620 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 PRSS33Q8NF86 280 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 PPP1R16AQ96I34 528 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 GBA3Q9H227 469 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 DYRK4Q9NR20 520 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 ZSCAN32Q9NX65 697 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 UBP1Q9NZI7 540 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 RNF14Q9UBS8 474 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 RSPH14Q9UHP6 348 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 RAI2Q9Y5P3 530 aa13.02□□□□□ -0.33
APTX-201ENST00000309615 PHF2O75151 1096 aa13.01□□□□□ -0.33
APTX-201ENST00000309615 ZNF189O75820 626 aaPredicted RBP13.01□□□□□ -0.33
APTX-201ENST00000309615 IGLV3-19P01714 112 aa13.01□□□□□ -0.33
APTX-201ENST00000309615 COILP38432 576 aaPredicted RBP13.01□□□□□ -0.33
APTX-201ENST00000309615 TCF15Q12870 199 aa13.01□□□□□ -0.33
APTX-201ENST00000309615 USP39Q53GS9 565 aaKnown RBP13.01□□□□□ -0.33
APTX-201ENST00000309615 LRRC73Q5JTD7 316 aa13.01□□□□□ -0.33
APTX-201ENST00000309615 PIP5KL1Q5T9C9 394 aa13.01□□□□□ -0.33
APTX-201ENST00000309615 AGBL4Q5VU57 503 aa13.01□□□□□ -0.33
APTX-201ENST00000309615 ARHGEF18Q6ZSZ5 1173 aa13.01□□□□□ -0.33
APTX-201ENST00000309615 ERN2Q76MJ5 926 aaKnown RBP13.01□□□□□ -0.33
APTX-201ENST00000309615 ZBTB44Q8NCP5 570 aa13.01□□□□□ -0.33
APTX-201ENST00000309615 PDCD6IPQ8WUM4 868 aaKnown RBP13.01□□□□□ -0.33
APTX-201ENST00000309615 TADA1Q96BN2 335 aa13.01□□□□□ -0.33
APTX-201ENST00000309615 ECHDC3Q96DC8 303 aa13.01□□□□□ -0.33
APTX-201ENST00000309615 GORASP1Q9BQQ3 440 aa13.01□□□□□ -0.33
APTX-201ENST00000309615 HDAC8Q9BY41 377 aa13.01□□□□□ -0.33
APTX-201ENST00000309615 IGHV1OR15-9A0A0B4J2B8 117 aa13□□□□□ -0.33
APTX-201ENST00000309615 HTRA2O43464 458 aaPredicted RBP13□□□□□ -0.33
APTX-201ENST00000309615 SOCS5O75159 536 aa13□□□□□ -0.33
APTX-201ENST00000309615 ZSCAN5DPP0CG00 497 aa13□□□□□ -0.33
APTX-201ENST00000309615 ADRB3P13945 408 aa13□□□□□ -0.33
APTX-201ENST00000309615 PSMB4P28070 264 aa13□□□□□ -0.33
APTX-201ENST00000309615 ACSL1P33121 698 aa13□□□□□ -0.33
APTX-201ENST00000309615 CFAP58Q5T655 872 aa13□□□□□ -0.33
APTX-201ENST00000309615 ITPRIPL1Q6GPH6 555 aa13□□□□□ -0.33
APTX-201ENST00000309615 FBXL19Q6PCT2 694 aa13□□□□□ -0.33
APTX-201ENST00000309615 CCDC137Q6PK04 289 aaKnown RBP13□□□□□ -0.33
APTX-201ENST00000309615 GSTA5Q7RTV2 222 aa13□□□□□ -0.33
APTX-201ENST00000309615 TTC7BQ86TV6 843 aa13□□□□□ -0.33
APTX-201ENST00000309615 KBTBD6Q86V97 674 aa13□□□□□ -0.33
APTX-201ENST00000309615 TAB3Q8N5C8 712 aaPredicted RBP13□□□□□ -0.33
APTX-201ENST00000309615 CCDC89Q8N998 374 aa13□□□□□ -0.33
APTX-201ENST00000309615 ATL2Q8NHH9 583 aa13□□□□□ -0.33
APTX-201ENST00000309615 KIF18AQ8NI77 898 aa13□□□□□ -0.33
APTX-201ENST00000309615 FAM131CQ96AQ9 280 aa13□□□□□ -0.33
APTX-201ENST00000309615 TOE1Q96GM8 510 aaKnown RBP13□□□□□ -0.33
APTX-201ENST00000309615 OXNAD1Q96HP4 312 aaPredicted RBP13□□□□□ -0.33
APTX-201ENST00000309615 FCRL5Q96RD9 977 aa13□□□□□ -0.33
APTX-201ENST00000309615 TDRD1Q9BXT4 1180 aaKnown RBP13□□□□□ -0.33
APTX-201ENST00000309615 DDX47Q9H0S4 455 aaKnown RBP13□□□□□ -0.33
APTX-201ENST00000309615 DKK3Q9UBP4 350 aa13□□□□□ -0.33
APTX-201ENST00000309615 MBD1Q9UIS9 605 aaPredicted RBP13□□□□□ -0.33
APTX-201ENST00000309615 CDC23Q9UJX2 597 aa13□□□□□ -0.33
APTX-201ENST00000309615 FZD4Q9ULV1 537 aa13□□□□□ -0.33
APTX-201ENST00000309615 NCKAP1Q9Y2A7 1128 aa13□□□□□ -0.33
APTX-201ENST00000309615 PCDHB9Q9Y5E1 797 aa13□□□□□ -0.33
APTX-201ENST00000309615 TSPAN11A1L157 253 aa12.99□□□□□ -0.33
APTX-201ENST00000309615 HRO43593 1189 aa12.99□□□□□ -0.33
APTX-201ENST00000309615 PMPCBO75439 489 aa12.99□□□□□ -0.33
APTX-201ENST00000309615 RPP40O75818 363 aaKnown RBP12.99□□□□□ -0.33
APTX-201ENST00000309615 PGLSO95336 258 aa12.99□□□□□ -0.33
APTX-201ENST00000309615 METTL18O95568 372 aa12.99□□□□□ -0.33
APTX-201ENST00000309615 PRLP01236 227 aa12.99□□□□□ -0.33
APTX-201ENST00000309615 PDHA1P08559 390 aa12.99□□□□□ -0.33
APTX-201ENST00000309615 TIMP2P16035 220 aa12.99□□□□□ -0.33
APTX-201ENST00000309615 BCKDHBP21953 392 aa12.99□□□□□ -0.33
APTX-201ENST00000309615 CD6P30203 668 aa12.99□□□□□ -0.33
APTX-201ENST00000309615 NEK3P51956 506 aa12.99□□□□□ -0.33
APTX-201ENST00000309615 TAS2R38P59533 333 aa12.99□□□□□ -0.33
APTX-201ENST00000309615 PCSK7Q16549 785 aa12.99□□□□□ -0.33
APTX-201ENST00000309615 P3H1Q32P28 736 aa12.99□□□□□ -0.33
APTX-201ENST00000309615 BRAT1Q6PJG6 821 aa12.99□□□□□ -0.33
APTX-201ENST00000309615 KDELC2Q7Z4H8 507 aa12.99□□□□□ -0.33
APTX-201ENST00000309615 OR14C36Q8NHC7 312 aa12.99□□□□□ -0.33
APTX-201ENST00000309615 HCAR2Q8TDS4 363 aa12.99□□□□□ -0.33
APTX-201ENST00000309615 SPACA7Q96KW9 195 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms