RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 TSC2P49815 1807 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 KNL1Q8NG31 2342 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 TLDC2A0PJX2 215 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 CASTOR2A6NHX0 329 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 E7ENQ6 273 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 INO80B-WBP1J3KQ70 363 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 LIN7AO14910 233 aaPredicted RBP5.05□□□□□ -1.6
CKS1B-201ENST00000308987 SPOPO43791 374 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 HNRNPCL1O60812 293 aaKnown RBP5.05□□□□□ -1.6
CKS1B-201ENST00000308987 HIP1RO75146 1068 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 CDH16O75309 829 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 ATP6V1G2O95670 118 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 TTC4O95801 387 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 SHBGP04278 402 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 VIMP08670 466 aaKnown RBP5.05□□□□□ -1.6
CKS1B-201ENST00000308987 PYGMP11217 842 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 PLS3P13797 630 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 NQO1P15559 274 aaKnown RBP5.05□□□□□ -1.6
CKS1B-201ENST00000308987 CEBPBP17676 345 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 CHRNB2P17787 502 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 FCARP24071 287 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 CCND1P24385 295 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 CCR2P41597 374 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 MXI1P50539 228 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 CCNG1P51959 295 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 IFI35P80217 286 aaPredicted RBP5.05□□□□□ -1.6
CKS1B-201ENST00000308987 FMO1Q01740 532 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 CDR2Q01850 454 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 GCNT1Q02742 428 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 DMWDQ09019 674 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 BNIP1Q12981 228 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 MTAPQ13126 283 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 UBXN2BQ14CS0 331 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 PSMD5Q16401 504 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 ARHGAP44Q17R89 818 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 ZNF528Q3MIS6 628 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 ZC2HC1CQ53FD0 456 aaPredicted RBP5.05□□□□□ -1.6
CKS1B-201ENST00000308987 XKR9Q5GH70 373 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 PRR31Q5SQ13 230 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 C1orf220Q5T0J3 134 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 FAM171A1Q5VUB5 890 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 KRT39Q6A163 491 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 TANGO2Q6ICL3 276 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 ACAD10Q6JQN1 1059 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 TTC27Q6P3X3 843 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 NOTUMQ6P988 496 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 RGS9BPQ6ZS82 235 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 ARHGEF18Q6ZSZ5 1173 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 EXOC3L1Q86VI1 746 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 ZC3H18Q86VM9 953 aaKnown RBP5.05□□□□□ -1.6
CKS1B-201ENST00000308987 TDRPQ86YL5 185 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 DCP2Q8IU60 420 aaKnown RBP5.05□□□□□ -1.6
CKS1B-201ENST00000308987 APLFQ8IW19 511 aaPredicted RBP5.05□□□□□ -1.6
CKS1B-201ENST00000308987 GPR65Q8IYL9 337 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 DAW1Q8N136 415 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 ATL2Q8NHH9 583 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 ZNF564Q8TBZ8 553 aaPredicted RBP5.05□□□□□ -1.6
CKS1B-201ENST00000308987 MDM1Q8TC05 714 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 PIGOQ8TEQ8 1089 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 ING5Q8WYH8 240 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 ARHGEF2Q92974 986 aaKnown RBP5.05□□□□□ -1.6
CKS1B-201ENST00000308987 C18orf8Q96DM3 657 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 TCEAL4Q96EI5 215 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 RSRC1Q96IZ7 334 aaKnown RBP5.05□□□□□ -1.6
CKS1B-201ENST00000308987 VCPIP1Q96JH7 1222 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 SELENOSQ9BQE4 189 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 MCMBPQ9BTE3 642 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 COLEC11Q9BWP8 271 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 TRIM31Q9BZY9 425 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 TRIM7Q9C029 511 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 NOD2Q9HC29 1040 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 PCDH18Q9HCL0 1135 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 TMEM8AQ9HCN3 771 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 GPRC5CQ9NQ84 441 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 PRMT8Q9NR22 394 aaPredicted RBP5.05□□□□□ -1.6
CKS1B-201ENST00000308987 ANKEF1Q9NU02 776 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 C2orf42Q9NWW7 574 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 SNTG2Q9NY99 539 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 TAS2R14Q9NYV8 317 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 STK39Q9UEW8 545 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 FBXO4Q9UKT5 387 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 PCDHB10Q9UN67 800 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 SSX2IPQ9Y2D8 614 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.05□□□□□ -1.6
CKS1B-201ENST00000308987 PCDHGB7Q9Y5F8 929 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 ADAMTS9Q9P2N4 1935 aa5.05□□□□□ -1.6
CKS1B-201ENST00000308987 NPIPB8E9PQR5 432 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 H0YCG3 227 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 I3L4J1 428 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 K7ENM7 598 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 THAP12O43422 761 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 PSTPIP1O43586 416 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 DKC1O60832 514 aaKnown RBP eCLIP5.04□□□□□ -1.6
CKS1B-201ENST00000308987 MOSPD3O75425 235 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 TADA2AO75478 443 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 RECQL4O94761 1208 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 HNRNPA1P09651 372 aaKnown RBP eCLIP5.04□□□□□ -1.6
CKS1B-201ENST00000308987 TRIM49P0CI25 452 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 TRIM49CP0CI26 452 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 CCNB1P14635 433 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms