RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 DSC2Q02487 901 aa22.34■■□□□ 1.17
SNUPN-201ENST00000308588 BCL2L1Q07817 233 aa22.34■■□□□ 1.17
SNUPN-201ENST00000308588 NIPAL4Q0D2K0 466 aa22.34■■□□□ 1.17
SNUPN-201ENST00000308588 CCDC15Q0P6D6 951 aa22.34■■□□□ 1.17
SNUPN-201ENST00000308588 FBXL19Q6PCT2 694 aa22.34■■□□□ 1.17
SNUPN-201ENST00000308588 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.34■■□□□ 1.17
SNUPN-201ENST00000308588 HCAR2Q8TDS4 363 aa22.34■■□□□ 1.17
SNUPN-201ENST00000308588 ECHDC3Q96DC8 303 aa22.34■■□□□ 1.17
SNUPN-201ENST00000308588 AGAP3Q96P47 875 aa22.34■■□□□ 1.17
SNUPN-201ENST00000308588 HAUS2Q9NVX0 235 aa22.34■■□□□ 1.17
SNUPN-201ENST00000308588 PCDHGC4Q9Y5F7 938 aa22.34■■□□□ 1.17
SNUPN-201ENST00000308588 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.33■■□□□ 1.17
SNUPN-201ENST00000308588 TSPAN11A1L157 253 aa22.33■■□□□ 1.17
SNUPN-201ENST00000308588 FAM47DPA6NHR8 397 aa22.33■■□□□ 1.17
SNUPN-201ENST00000308588 METTL12A8MUP2 240 aa22.33■■□□□ 1.17
SNUPN-201ENST00000308588 MTSS1O43312 755 aa22.33■■□□□ 1.17
SNUPN-201ENST00000308588 TIMP2P16035 220 aa22.33■■□□□ 1.17
SNUPN-201ENST00000308588 CES1P23141 567 aa22.33■■□□□ 1.17
SNUPN-201ENST00000308588 DHPSP49366 369 aaPredicted RBP22.33■■□□□ 1.17
SNUPN-201ENST00000308588 LAIR1Q6GTX8 287 aa22.33■■□□□ 1.17
SNUPN-201ENST00000308588 ARMCX6Q7L4S7 300 aa22.33■■□□□ 1.17
SNUPN-201ENST00000308588 ADAT2Q7Z6V5 191 aaKnown RBP22.33■■□□□ 1.17
SNUPN-201ENST00000308588 ZSWIM9Q86XI8 627 aa22.33■■□□□ 1.17
SNUPN-201ENST00000308588 OR2T34Q8NGX1 318 aa22.33■■□□□ 1.17
SNUPN-201ENST00000308588 SLC35B2Q8TB61 432 aa22.33■■□□□ 1.17
SNUPN-201ENST00000308588 TEKT5Q96M29 485 aa22.33■■□□□ 1.17
SNUPN-201ENST00000308588 PCED1AQ9H1Q7 454 aa22.33■■□□□ 1.17
SNUPN-201ENST00000308588 KDM4CQ9H3R0 1056 aa22.33■■□□□ 1.17
SNUPN-201ENST00000308588 BCLAF3A2AJT9 711 aaKnown RBP22.32■■□□□ 1.16
SNUPN-201ENST00000308588 LRRC72A6NJI9 287 aa22.32■■□□□ 1.16
SNUPN-201ENST00000308588 HTRA2O43464 458 aaPredicted RBP22.32■■□□□ 1.16
SNUPN-201ENST00000308588 CEP104O60308 925 aa22.32■■□□□ 1.16
SNUPN-201ENST00000308588 ABL2P42684 1182 aa22.32■■□□□ 1.16
SNUPN-201ENST00000308588 GNG11P61952 73 aa22.32■■□□□ 1.16
SNUPN-201ENST00000308588 DARS2Q6PI48 645 aaKnown RBP22.32■■□□□ 1.16
SNUPN-201ENST00000308588 CDKL3Q8IVW4 592 aaPredicted RBP22.32■■□□□ 1.16
SNUPN-201ENST00000308588 FOXJ1Q92949 421 aa22.32■■□□□ 1.16
SNUPN-201ENST00000308588 LOXL4Q96JB6 756 aa22.32■■□□□ 1.16
SNUPN-201ENST00000308588 HSPA12BQ96MM6 686 aa22.32■■□□□ 1.16
SNUPN-201ENST00000308588 WDR24Q96S15 920 aa22.32■■□□□ 1.16
SNUPN-201ENST00000308588 USP29Q9HBJ7 922 aa22.32■■□□□ 1.16
SNUPN-201ENST00000308588 FADS3Q9Y5Q0 445 aa22.32■■□□□ 1.16
SNUPN-201ENST00000308588 CEP192Q8TEP8 1941 aa22.32■■□□□ 1.16
SNUPN-201ENST00000308588 GON4LQ3T8J9 2241 aa22.32■■□□□ 1.16
SNUPN-201ENST00000308588 ANKRD36A6QL64 1941 aa22.32■■□□□ 1.16
SNUPN-201ENST00000308588 SOCS5O75159 536 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 MMP2P08253 660 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 TRAF2Q12933 501 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 SIX1Q15475 284 aaPredicted RBP22.31■■□□□ 1.16
SNUPN-201ENST00000308588 BRAT1Q6PJG6 821 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 TTC7BQ86TV6 843 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 ATG4AQ8WYN0 398 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 RAB7BQ96AH8 199 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 PBKQ96KB5 322 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 VAT1Q99536 393 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 TBC1D3DA0A087WVF3 549 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 TBC1D3IA0A087WXS9 549 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 TBC1D3EA0A087X179 549 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 TBC1D3KA0A087X1G2 549 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 TBC1D3FA6NER0 549 aaPredicted RBP22.31■■□□□ 1.16
SNUPN-201ENST00000308588 TBC1D3LB9A6J9 549 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 SPINT1O43278 529 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 FGGP02679 453 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 TBC1D3HP0C7X1 549 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 CD68P34810 354 aaPredicted RBP22.31■■□□□ 1.16
SNUPN-201ENST00000308588 UGP2Q16851 508 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 LRRC73Q5JTD7 316 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 LYSMD4Q5XG99 296 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 KIAA0895LQ68EN5 471 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 TBC1D3GQ6DHY5 549 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 TBC1D3CQ6IPX1 549 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 ASCL5Q7RTU5 278 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 TBC1D3Q8IZP1 549 aaPredicted RBP22.31■■□□□ 1.16
SNUPN-201ENST00000308588 ZNF567Q8N184 647 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 SPOCK2Q92563 424 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 BIRC7Q96CA5 298 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 PREBQ9HCU5 417 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 DNPEPQ9ULA0 475 aa22.31■■□□□ 1.16
SNUPN-201ENST00000308588 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.31■■□□□ 1.16
SNUPN-201ENST00000308588 PRR23AA6NEV1 266 aa22.3■■□□□ 1.16
SNUPN-201ENST00000308588 AREL1O15033 823 aa22.3■■□□□ 1.16
SNUPN-201ENST00000308588 AP1G1O43747 822 aa22.3■■□□□ 1.16
SNUPN-201ENST00000308588 IGHV4-34P06331 123 aa22.3■■□□□ 1.16
SNUPN-201ENST00000308588 ITIH2P19823 946 aa22.3■■□□□ 1.16
SNUPN-201ENST00000308588 ITPKAP23677 461 aa22.3■■□□□ 1.16
SNUPN-201ENST00000308588 PPP2CBP62714 309 aa22.3■■□□□ 1.16
SNUPN-201ENST00000308588 PPP2CAP67775 309 aa22.3■■□□□ 1.16
SNUPN-201ENST00000308588 CFAP58Q5T655 872 aa22.3■■□□□ 1.16
SNUPN-201ENST00000308588 PRPF39Q86UA1 669 aaKnown RBP22.3■■□□□ 1.16
SNUPN-201ENST00000308588 RASGEF1CQ8N431 466 aa22.3■■□□□ 1.16
SNUPN-201ENST00000308588 DNASE2BQ8WZ79 361 aa22.3■■□□□ 1.16
SNUPN-201ENST00000308588 IMP4Q96G21 291 aaKnown RBP22.3■■□□□ 1.16
SNUPN-201ENST00000308588 OSBPL9Q96SU4 736 aa22.3■■□□□ 1.16
SNUPN-201ENST00000308588 SLC25A51Q9H1U9 297 aa22.3■■□□□ 1.16
SNUPN-201ENST00000308588 GLOD4Q9HC38 313 aa22.3■■□□□ 1.16
SNUPN-201ENST00000308588 SNX12Q9UMY4 172 aa22.3■■□□□ 1.16
SNUPN-201ENST00000308588 RAI2Q9Y5P3 530 aa22.3■■□□□ 1.16
SNUPN-201ENST00000308588 UPK3BL1B0FP48 263 aa22.29■■□□□ 1.16
SNUPN-201ENST00000308588 UPK3BL2E5RIL1 263 aa22.29■■□□□ 1.16
SNUPN-201ENST00000308588 KCNN4O15554 427 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms