RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 CLEC4CQ8WTT0 213 aa16.39■□□□□ 0.21
CCDC8-201ENST00000307522 CANT1Q8WVQ1 401 aa16.39■□□□□ 0.21
CCDC8-201ENST00000307522 WARS2Q9UGM6 360 aaKnown RBP16.39■□□□□ 0.21
CCDC8-201ENST00000307522 CNOT6Q9ULM6 557 aaKnown RBP16.39■□□□□ 0.21
CCDC8-201ENST00000307522 SLC8A2Q9UPR5 921 aa16.39■□□□□ 0.21
CCDC8-201ENST00000307522 GPSM3Q9Y4H4 160 aa16.39■□□□□ 0.21
CCDC8-201ENST00000307522 BCAS2O75934 225 aaPredicted RBP16.39■□□□□ 0.21
CCDC8-201ENST00000307522 C1QBPQ07021 282 aaKnown RBP16.39■□□□□ 0.21
CCDC8-201ENST00000307522 FAM102AQ5T9C2 384 aaPredicted RBP16.39■□□□□ 0.21
CCDC8-201ENST00000307522 HTRA1Q92743 480 aa16.39■□□□□ 0.21
CCDC8-201ENST00000307522 SLC45A3Q96JT2 553 aa16.39■□□□□ 0.21
CCDC8-201ENST00000307522 PEBP4Q96S96 227 aa16.39■□□□□ 0.21
CCDC8-201ENST00000307522 MRPL46Q9H2W6 279 aaKnown RBP16.39■□□□□ 0.21
CCDC8-201ENST00000307522 UTP6Q9NYH9 597 aaKnown RBP16.39■□□□□ 0.21
CCDC8-201ENST00000307522 TRIP12Q14669 1992 aaPredicted RBP16.39■□□□□ 0.21
CCDC8-201ENST00000307522 PIGRP01833 764 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 HMGCRP04035 888 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 LMO2P25791 158 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 CLDN10P78369 228 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 KATNBL1Q9H079 304 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 C2orf40Q9H1Z8 148 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 VTA1Q9NP79 307 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 TNPO2O14787 897 aaKnown RBP16.38■□□□□ 0.21
CCDC8-201ENST00000307522 BCL10O95999 233 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 GRK2P25098 689 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 TMEM35BQ8NCS4 154 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 ACVR1CQ8NER5 493 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 SGF29Q96ES7 293 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 PARK7Q99497 189 aaKnown RBP16.38■□□□□ 0.21
CCDC8-201ENST00000307522 FANCEQ9HB96 536 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 NGRNQ9NPE2 291 aaKnown RBP16.38■□□□□ 0.21
CCDC8-201ENST00000307522 ITM2CQ9NQX7 267 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 VPS45Q9NRW7 570 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 XYLBO75191 536 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 TBXAS1P24557 533 aaPredicted RBP16.38■□□□□ 0.21
CCDC8-201ENST00000307522 PRKCHP24723 683 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 CTGFP29279 349 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 EEF1DP29692 281 aaKnown RBP16.38■□□□□ 0.21
CCDC8-201ENST00000307522 IFITM3Q01628 133 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 PRKCQQ04759 706 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 CCDC153Q494R4 210 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 DUSP28Q4G0W2 176 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 NEPROQ6NW34 567 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 ADPGKQ9BRR6 497 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 DGCR6LQ9BY27 220 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 PALMDQ9NP74 551 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 CCDC167Q9P0B6 97 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 MOSPD1Q9UJG1 213 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 CPQQ9Y646 472 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 SQORQ9Y6N5 450 aa16.38■□□□□ 0.21
CCDC8-201ENST00000307522 PRORSD1PA6NEY8 169 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 SOBPA7XYQ1 873 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 FAM47E-STBD1D6RA91 191 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 APOC4-APOC2K7ER74 178 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 TK2O00142 265 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 NOL3O60936 208 aaKnown RBP16.37■□□□□ 0.21
CCDC8-201ENST00000307522 RECQL4O94761 1208 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 MICAL2O94851 1124 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 APOC2P02655 101 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 ELK4P28324 431 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 AVPR1AP37288 418 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 GNASQ5JWF2 1037 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 ENOSF1Q7L5Y1 443 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 KIAA2013Q8IYS2 634 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 ALDH16A1Q8IZ83 802 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.37■□□□□ 0.21
CCDC8-201ENST00000307522 OSBPL10Q9BXB5 764 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 ABHD16BQ9H3Z7 469 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 LTB4R2Q9NPC1 389 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 PRMT7Q9NVM4 692 aaPredicted RBP16.37■□□□□ 0.21
CCDC8-201ENST00000307522 PADI4Q9UM07 663 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 PFDN6O15212 129 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 CYP3A5P20815 502 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 HPCAL1P37235 193 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 ACADVLP49748 655 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 NHSL2Q5HYW2 709 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 FAM209AQ5JX71 171 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 TWF2Q6IBS0 349 aaKnown RBP16.37■□□□□ 0.21
CCDC8-201ENST00000307522 EXOC8Q8IYI6 725 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 CCNYL1Q8N7R7 359 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 TNFSF13BQ9Y275 285 aa16.37■□□□□ 0.21
CCDC8-201ENST00000307522 ANKRD34BA5PLL1 514 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 C9IYK1 514 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 AURKAO14965 403 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 USP12O75317 370 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 BAIAP3O94812 1187 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 BMP10O95393 424 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 LCP1P13796 627 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 HOXA11P31270 313 aaPredicted RBP16.36■□□□□ 0.21
CCDC8-201ENST00000307522 IFRD2Q12894 506 aaPredicted RBP16.36■□□□□ 0.21
CCDC8-201ENST00000307522 SLC13A2Q13183 592 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 PIGHQ14442 188 aaPredicted RBP16.36■□□□□ 0.21
CCDC8-201ENST00000307522 INAVAQ3KP66 663 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 REM2Q8IYK8 340 aaPredicted RBP16.36■□□□□ 0.21
CCDC8-201ENST00000307522 DEPDC4Q8N2C3 294 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 PCYOX1LQ8NBM8 494 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 OR9I1Q8NGQ6 314 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 ALPK1Q96QP1 1244 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 NUDT5Q9UKK9 219 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 ATP11BQ9Y2G3 1177 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms