RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 H3BRB1 525 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 ANGPT2O15123 496 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 GAS2O43903 313 aaKnown RBP14.72□□□□□ -0.05
PTPN9-201ENST00000306726 NRP2O60462 931 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 DDHD2O94830 711 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 IL18RAPO95256 599 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 TFAP2AP05549 437 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 ZNF865P0CJ78 1059 aaPredicted RBP14.72□□□□□ -0.05
PTPN9-201ENST00000306726 CYBAP13498 195 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 ZFXP17010 805 aaPredicted RBP14.72□□□□□ -0.05
PTPN9-201ENST00000306726 MBTD1Q05BQ5 628 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 ANKDD1AQ495B1 522 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 SLC44A4Q53GD3 710 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 MIB1Q86YT6 1006 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 NIPA2Q8N8Q9 360 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 OR6J1Q8NGC5 347 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 VPS33AQ96AX1 596 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 TUT1Q9H6E5 874 aaKnown RBP14.72□□□□□ -0.05
PTPN9-201ENST00000306726 POLR1BQ9H9Y6 1135 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 NCKIPSDQ9NZQ3 722 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 CDC14AQ9UNH5 594 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 SF3B1O75533 1304 aaKnown RBP eCLIP14.72□□□□□ -0.05
PTPN9-201ENST00000306726 PSMD12O00232 456 aaPredicted RBP14.72□□□□□ -0.05
PTPN9-201ENST00000306726 SEPT4O43236 478 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 ASLP04424 464 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 LINC00032P0C843 101 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 HOXD8P13378 290 aaPredicted RBP14.72□□□□□ -0.05
PTPN9-201ENST00000306726 NFKBIAP25963 317 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 TAS2R39P59534 338 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 PIGFQ07326 219 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 FBXO47Q5MNV8 452 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 CCDC81Q6ZN84 652 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 GPR141Q7Z602 305 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 RALGPS2Q86X27 583 aaPredicted RBP14.72□□□□□ -0.05
PTPN9-201ENST00000306726 SNX29P2Q8IUI4 249 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 CLEC4FQ8N1N0 589 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 BPIFB6Q8NFQ5 453 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 SEMA4BQ9NPR2 832 aaPredicted RBP14.72□□□□□ -0.05
PTPN9-201ENST00000306726 ITGA11Q9UKX5 1188 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 GON4LQ3T8J9 2241 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 COL1A2P08123 1366 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 YJEFN3A6XGL0 299 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 PPP6CO00743 305 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 BIRC5O15392 142 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 HBP1O60381 514 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 PPARGP37231 505 aaPredicted RBP14.71□□□□□ -0.05
PTPN9-201ENST00000306726 ITGADQ13349 1161 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 BFSP2Q13515 415 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 RBM20Q5T481 1227 aaKnown RBP14.71□□□□□ -0.05
PTPN9-201ENST00000306726 LCLAT1Q6UWP7 414 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 PRR23BQ6ZRT6 265 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 PDZD4Q76G19 769 aaPredicted RBP14.71□□□□□ -0.05
PTPN9-201ENST00000306726 RNF168Q8IYW5 571 aaPredicted RBP14.71□□□□□ -0.05
PTPN9-201ENST00000306726 FBXL20Q96IG2 436 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 SPON2Q9BUD6 331 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 RBM22Q9NW64 420 aaKnown RBP eCLIP14.71□□□□□ -0.05
PTPN9-201ENST00000306726 OR12D3Q9UGF7 316 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 U3KQV3 271 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 BCLAF3A2AJT9 711 aaKnown RBP14.71□□□□□ -0.05
PTPN9-201ENST00000306726 B4GAT1O43505 415 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 B4GALT4O60513 344 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 SRP72O76094 671 aaKnown RBP14.71□□□□□ -0.05
PTPN9-201ENST00000306726 EEF1DP29692 281 aaKnown RBP14.71□□□□□ -0.05
PTPN9-201ENST00000306726 MYBPC1Q00872 1141 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 ARHGAP1Q07960 439 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 TBCCQ15814 346 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 CYP51A1Q16850 503 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 OGFOD2Q6N063 350 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 CNSTQ6PJW8 725 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 CPNE1Q99829 537 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 NT5MQ9NPB1 228 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 RPL26L1Q9UNX3 145 aaKnown RBP14.71□□□□□ -0.05
PTPN9-201ENST00000306726 LINC00854A0A1B0GVQ3 168 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 SNNO75324 88 aaPredicted RBP14.71□□□□□ -0.05
PTPN9-201ENST00000306726 MYCP01106 439 aaPredicted RBP14.71□□□□□ -0.05
PTPN9-201ENST00000306726 RPLP2P05387 115 aaKnown RBP14.71□□□□□ -0.05
PTPN9-201ENST00000306726 DCTN2Q13561 401 aaKnown RBP14.71□□□□□ -0.05
PTPN9-201ENST00000306726 PFKFB4Q16877 469 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 PIM3Q86V86 326 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 KCNA7Q96RP8 456 aa14.71□□□□□ -0.05
PTPN9-201ENST00000306726 HEATR9A2RTY3 570 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 TKTP29401 623 aaKnown RBP14.7□□□□□ -0.06
PTPN9-201ENST00000306726 PIK3CGP48736 1102 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 HTRA3P83110 453 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 BST2Q10589 180 aaKnown RBP14.7□□□□□ -0.06
PTPN9-201ENST00000306726 BNIP3Q12983 259 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 ZBTB17Q13105 803 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 IMPG1Q17R60 797 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 C11orf91Q3C1V1 193 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 TBC1D25Q3MII6 688 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 LRCH3Q96II8 777 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 EXOC2Q96KP1 924 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 RNF145Q96MT1 663 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 ZNF670Q9BS34 389 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 TBCDQ9BTW9 1192 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 EBF1Q9UH73 591 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 TRIP11Q15643 1979 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 EVPLQ92817 2033 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 A0A0U1RQS6 177 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 CLOCKO15516 846 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms