RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 LCLAT1Q6UWP7 414 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 ZC3H7AQ8IWR0 971 aaKnown RBP13.15□□□□□ -0.3
TRIM35-201ENST00000305364 TMEM192Q8IY95 271 aa13.15□□□□□ -0.3
TRIM35-201ENST00000305364 KANSL1LA0AUZ9 987 aa13.15□□□□□ -0.31
TRIM35-201ENST00000305364 AP3B1O00203 1094 aa13.15□□□□□ -0.31
TRIM35-201ENST00000305364 NEK2P51955 445 aa13.15□□□□□ -0.31
TRIM35-201ENST00000305364 VPS26BQ4G0F5 336 aa13.15□□□□□ -0.31
TRIM35-201ENST00000305364 LINC00523Q86TU6 105 aa13.15□□□□□ -0.31
TRIM35-201ENST00000305364 CUZD1Q86UP6 607 aa13.15□□□□□ -0.31
TRIM35-201ENST00000305364 HEATR4Q86WZ0 1026 aa13.15□□□□□ -0.31
TRIM35-201ENST00000305364 ANKRD13AQ8IZ07 590 aa13.15□□□□□ -0.31
TRIM35-201ENST00000305364 TMEM130Q8N3G9 435 aa13.15□□□□□ -0.31
TRIM35-201ENST00000305364 OSCP1Q8WVF1 389 aa13.15□□□□□ -0.31
TRIM35-201ENST00000305364 ARFGEF1Q9Y6D6 1849 aa13.15□□□□□ -0.31
TRIM35-201ENST00000305364 MTSS1O43312 755 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 PIGRP01833 764 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 GNAO1P09471 354 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 ACADSBP45954 432 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 RPS9P46781 194 aaKnown RBP13.14□□□□□ -0.31
TRIM35-201ENST00000305364 TXNL4AP83876 142 aaKnown RBP13.14□□□□□ -0.31
TRIM35-201ENST00000305364 CHRNB3Q05901 458 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 NIPAL4Q0D2K0 466 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 ZNF846Q147U1 533 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 TGFBIQ15582 683 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 APOBEC3FQ8IUX4 373 aaKnown RBP13.14□□□□□ -0.31
TRIM35-201ENST00000305364 CCDC103Q8IW40 242 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 MICU2Q8IYU8 434 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 MIER2Q8N344 545 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 NAT16Q8N8M0 369 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 SCAIQ8N9R8 606 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 CENPNQ96H22 339 aaPredicted RBP13.14□□□□□ -0.31
TRIM35-201ENST00000305364 SMOXQ9NWM0 555 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 UTP6Q9NYH9 597 aaKnown RBP13.14□□□□□ -0.31
TRIM35-201ENST00000305364 SFMBT1Q9UHJ3 866 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 GNPTGQ9UJJ9 305 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 ADGRA2Q96PE1 1338 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 A0A0J9YYE9 177 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 HTR3EA5X5Y0 456 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 ATE1O95260 518 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 CLCN2P51788 898 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 BCAT1P54687 386 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 DGCR6Q14129 220 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 CYP2A13Q16696 494 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 NIPAL1Q6NVV3 410 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 CRTC3Q6UUV7 619 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 CLEC4CQ8WTT0 213 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 TSPAN17Q96FV3 270 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 ZNF597Q96LX8 424 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 NSMCE2Q96MF7 247 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 CACNA2D2Q9NY47 1150 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 CLDN25C9JDP6 229 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 DLX3O60479 287 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 RBP1P09455 135 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 ZNF26P17031 533 aaPredicted RBP13.14□□□□□ -0.31
TRIM35-201ENST00000305364 NMBRP28336 390 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 CLK1P49759 484 aaKnown RBP13.14□□□□□ -0.31
TRIM35-201ENST00000305364 ADIGQ0VDE8 80 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 BST2Q10589 180 aaKnown RBP13.14□□□□□ -0.31
TRIM35-201ENST00000305364 PMS2P3Q13401 168 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 PRMT9Q6P2P2 845 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 DCDC5Q6ZRR9 648 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 RPS27LQ71UM5 84 aaKnown RBP13.14□□□□□ -0.31
TRIM35-201ENST00000305364 OR7A2PQ8NGA2 310 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 FICDQ9BVA6 458 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 FAM49AQ9H0Q0 323 aaPredicted RBP13.14□□□□□ -0.31
TRIM35-201ENST00000305364 XYLT2Q9H1B5 865 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 MID1IP1Q9NPA3 183 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 DDIT4Q9NX09 232 aa13.14□□□□□ -0.31
TRIM35-201ENST00000305364 A0A087WZ62 844 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 PRORSD1PA6NEY8 169 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 PLOD2O00469 737 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 MPP1Q00013 466 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 TRAP1Q12931 704 aaKnown RBP13.13□□□□□ -0.31
TRIM35-201ENST00000305364 PGS1Q32NB8 556 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 PAGE2BQ5JRK9 111 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 STYK1Q6J9G0 422 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 CATSPER4Q7RTX7 472 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 NDRG1Q92597 394 aaKnown RBP13.13□□□□□ -0.31
TRIM35-201ENST00000305364 HDAC10Q969S8 669 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 FCRL3Q96P31 734 aaPredicted RBP13.13□□□□□ -0.31
TRIM35-201ENST00000305364 MRPL57Q9BQC6 102 aaKnown RBP13.13□□□□□ -0.31
TRIM35-201ENST00000305364 FDXACB1Q9BRP7 624 aaPredicted RBP13.13□□□□□ -0.31
TRIM35-201ENST00000305364 SETD4Q9NVD3 440 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 TUBA8Q9NY65 449 aaPredicted RBP13.13□□□□□ -0.31
TRIM35-201ENST00000305364 PTBP2Q9UKA9 531 aaKnown RBP13.13□□□□□ -0.31
TRIM35-201ENST00000305364 CNOT11Q9UKZ1 510 aaKnown RBP13.13□□□□□ -0.31
TRIM35-201ENST00000305364 TRAF6Q9Y4K3 522 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 ST14Q9Y5Y6 855 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 PARNO95453 639 aaKnown RBP13.13□□□□□ -0.31
TRIM35-201ENST00000305364 S100A1P23297 94 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 ARRB2P32121 409 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 SLCO6A1Q86UG4 719 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 ALDH16A1Q8IZ83 802 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 C8orf59Q8N0T1 100 aaPredicted RBP13.13□□□□□ -0.31
TRIM35-201ENST00000305364 TMEM102Q8N9M5 508 aaPredicted RBP13.13□□□□□ -0.31
TRIM35-201ENST00000305364 RBM38Q9H0Z9 239 aaKnown RBP13.13□□□□□ -0.31
TRIM35-201ENST00000305364 HACD3Q9P035 362 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 IFT80Q9P2H3 777 aaPredicted RBP13.13□□□□□ -0.31
TRIM35-201ENST00000305364 SPATA31C2B4DYI2 1134 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 G3V2L1 256 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms