RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 HAUS5O94927 633 aa19.6■□□□□ 0.73
HOXC4-201ENST00000303406 F11P03951 625 aa19.6■□□□□ 0.73
HOXC4-201ENST00000303406 RHOCP08134 193 aa19.6■□□□□ 0.73
HOXC4-201ENST00000303406 SERPINF2P08697 491 aa19.6■□□□□ 0.73
HOXC4-201ENST00000303406 LEPRP48357 1165 aaKnown RBP19.6■□□□□ 0.73
HOXC4-201ENST00000303406 CLCN5P51795 746 aa19.6■□□□□ 0.73
HOXC4-201ENST00000303406 RAB10P61026 200 aa19.6■□□□□ 0.73
HOXC4-201ENST00000303406 IRX4P78413 519 aa19.6■□□□□ 0.73
HOXC4-201ENST00000303406 ELF3P78545 371 aaPredicted RBP19.6■□□□□ 0.73
HOXC4-201ENST00000303406 RIPK1Q13546 671 aa19.6■□□□□ 0.73
HOXC4-201ENST00000303406 TSNAXIP1Q2TAA8 658 aa19.6■□□□□ 0.73
HOXC4-201ENST00000303406 WDR75Q8IWA0 830 aaKnown RBP19.6■□□□□ 0.73
HOXC4-201ENST00000303406 DENND6AQ8IWF6 608 aa19.6■□□□□ 0.73
HOXC4-201ENST00000303406 PIWIL2Q8TC59 973 aaKnown RBP19.6■□□□□ 0.73
HOXC4-201ENST00000303406 IFT43Q96FT9 208 aa19.6■□□□□ 0.73
HOXC4-201ENST00000303406 RAB3IPQ96QF0 476 aaPredicted RBP19.6■□□□□ 0.73
HOXC4-201ENST00000303406 RNF38Q9H0F5 515 aa19.6■□□□□ 0.73
HOXC4-201ENST00000303406 CAB39LQ9H9S4 337 aa19.6■□□□□ 0.73
HOXC4-201ENST00000303406 ARIH1Q9Y4X5 557 aaPredicted RBP19.6■□□□□ 0.73
HOXC4-201ENST00000303406 G3V2L1 256 aa19.59■□□□□ 0.73
HOXC4-201ENST00000303406 T-ENOLP0DO92 83 aa19.59■□□□□ 0.73
HOXC4-201ENST00000303406 STMN1P16949 149 aa19.59■□□□□ 0.73
HOXC4-201ENST00000303406 KPNA2P52292 529 aaKnown RBP19.59■□□□□ 0.73
HOXC4-201ENST00000303406 RPS24P62847 133 aaKnown RBP19.59■□□□□ 0.73
HOXC4-201ENST00000303406 MPP1Q00013 466 aa19.59■□□□□ 0.73
HOXC4-201ENST00000303406 NSUN2Q08J23 767 aaKnown RBP eCLIP19.59■□□□□ 0.73
HOXC4-201ENST00000303406 LRRC26Q2I0M4 334 aa19.59■□□□□ 0.73
HOXC4-201ENST00000303406 IL31Q6EBC2 164 aa19.59■□□□□ 0.73
HOXC4-201ENST00000303406 ZNF470Q6ECI4 717 aa19.59■□□□□ 0.73
HOXC4-201ENST00000303406 FBXO46Q6PJ61 603 aaPredicted RBP19.59■□□□□ 0.73
HOXC4-201ENST00000303406 RAPH1Q70E73 1250 aa19.59■□□□□ 0.73
HOXC4-201ENST00000303406 TBC1D1Q86TI0 1168 aaPredicted RBP19.59■□□□□ 0.73
HOXC4-201ENST00000303406 TMEM199Q8N511 208 aa19.59■□□□□ 0.73
HOXC4-201ENST00000303406 OR7D4Q8NG98 312 aa19.59■□□□□ 0.73
HOXC4-201ENST00000303406 OR13J1Q8NGT2 312 aa19.59■□□□□ 0.73
HOXC4-201ENST00000303406 PPP4R1Q8TF05 950 aa19.59■□□□□ 0.73
HOXC4-201ENST00000303406 C20orf27Q9GZN8 174 aa19.59■□□□□ 0.73
HOXC4-201ENST00000303406 ACOT9Q9Y305 439 aa19.59■□□□□ 0.73
HOXC4-201ENST00000303406 KIAA1671Q9BY89 1806 aa19.58■□□□□ 0.73
HOXC4-201ENST00000303406 A0A0D9SEW6 157 aa19.58■□□□□ 0.73
HOXC4-201ENST00000303406 CCDC78A2IDD5 438 aa19.58■□□□□ 0.73
HOXC4-201ENST00000303406 MUSKO15146 869 aa19.58■□□□□ 0.73
HOXC4-201ENST00000303406 NDST3O95803 873 aa19.58■□□□□ 0.73
HOXC4-201ENST00000303406 SLC35E2BP0CK96 405 aa19.58■□□□□ 0.73
HOXC4-201ENST00000303406 ALOX15P16050 662 aaPredicted RBP19.58■□□□□ 0.73
HOXC4-201ENST00000303406 CR2P20023 1033 aa19.58■□□□□ 0.73
HOXC4-201ENST00000303406 SERPINB3P29508 390 aa19.58■□□□□ 0.73
HOXC4-201ENST00000303406 HNRNPH1P31943 449 aaKnown RBP19.58■□□□□ 0.73
HOXC4-201ENST00000303406 ABCE1P61221 599 aaKnown RBP19.58■□□□□ 0.73
HOXC4-201ENST00000303406 IRF9Q00978 393 aa19.58■□□□□ 0.73
HOXC4-201ENST00000303406 ZBTB16Q05516 673 aa19.58■□□□□ 0.73
HOXC4-201ENST00000303406 CTBP1Q13363 440 aa19.58■□□□□ 0.73
HOXC4-201ENST00000303406 DLG2Q15700 870 aa19.58■□□□□ 0.73
HOXC4-201ENST00000303406 ZYG11AQ6WRX3 759 aa19.58■□□□□ 0.73
HOXC4-201ENST00000303406 ZCCHC23Q6ZST2 131 aa19.58■□□□□ 0.73
HOXC4-201ENST00000303406 TMEM150AQ86TG1 271 aa19.58■□□□□ 0.73
HOXC4-201ENST00000303406 ACVR1CQ8NER5 493 aa19.58■□□□□ 0.73
HOXC4-201ENST00000303406 SCG3Q8WXD2 468 aaKnown RBP19.58■□□□□ 0.73
HOXC4-201ENST00000303406 ZFRQ96KR1 1074 aaKnown RBP19.58■□□□□ 0.73
HOXC4-201ENST00000303406 TRIB3Q96RU7 358 aa19.58■□□□□ 0.73
HOXC4-201ENST00000303406 CINPQ9BW66 212 aaPredicted RBP19.58■□□□□ 0.73
HOXC4-201ENST00000303406 GKN1Q9NS71 199 aa19.58■□□□□ 0.73
HOXC4-201ENST00000303406 ZNF358Q9NW07 568 aa19.58■□□□□ 0.73
HOXC4-201ENST00000303406 SORCS3Q9UPU3 1222 aa19.58■□□□□ 0.73
HOXC4-201ENST00000303406 PCDHB12Q9Y5F1 795 aa19.58■□□□□ 0.73
HOXC4-201ENST00000303406 C2orf78A6NCI8 922 aa19.57■□□□□ 0.72
HOXC4-201ENST00000303406 GFRA2O00451 464 aa19.57■□□□□ 0.72
HOXC4-201ENST00000303406 LDB2O43679 373 aa19.57■□□□□ 0.72
HOXC4-201ENST00000303406 CCDC22O60826 627 aa19.57■□□□□ 0.72
HOXC4-201ENST00000303406 TRIM13O60858 407 aa19.57■□□□□ 0.72
HOXC4-201ENST00000303406 MBL2P11226 248 aaPredicted RBP19.57■□□□□ 0.72
HOXC4-201ENST00000303406 CSF2RAP15509 400 aa19.57■□□□□ 0.72
HOXC4-201ENST00000303406 HOXB8P17481 243 aaPredicted RBP19.57■□□□□ 0.72
HOXC4-201ENST00000303406 ABCG1P45844 678 aa19.57■□□□□ 0.72
HOXC4-201ENST00000303406 HK2P52789 917 aa19.57■□□□□ 0.72
HOXC4-201ENST00000303406 SLC20A2Q08357 652 aa19.57■□□□□ 0.72
HOXC4-201ENST00000303406 TBCCQ15814 346 aa19.57■□□□□ 0.72
HOXC4-201ENST00000303406 KDELC2Q7Z4H8 507 aa19.57■□□□□ 0.72
HOXC4-201ENST00000303406 SLC41A1Q8IVJ1 513 aa19.57■□□□□ 0.72
HOXC4-201ENST00000303406 FAM217AQ8IXS0 508 aa19.57■□□□□ 0.72
HOXC4-201ENST00000303406 GPR150Q8NGU9 434 aa19.57■□□□□ 0.72
HOXC4-201ENST00000303406 BRSK1Q8TDC3 778 aa19.57■□□□□ 0.72
HOXC4-201ENST00000303406 TSPAN17Q96FV3 270 aa19.57■□□□□ 0.72
HOXC4-201ENST00000303406 ZBP1Q9H171 429 aa19.57■□□□□ 0.72
HOXC4-201ENST00000303406 IL21Q9HBE4 155 aa19.57■□□□□ 0.72
HOXC4-201ENST00000303406 OXSMQ9NWU1 459 aa19.57■□□□□ 0.72
HOXC4-201ENST00000303406 CORO1CQ9ULV4 474 aaPredicted RBP19.57■□□□□ 0.72
HOXC4-201ENST00000303406 TRIM43BA6NCK2 446 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 HGSO14964 777 aaPredicted RBP19.56■□□□□ 0.72
HOXC4-201ENST00000303406 CTSAP10619 480 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 PSMA3P25788 255 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 AQP5P55064 265 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 KCNJ2P63252 427 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 ITGA9Q13797 1035 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 PARP9Q8IXQ6 854 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 HJURPQ8NCD3 748 aaPredicted RBP19.56■□□□□ 0.72
HOXC4-201ENST00000303406 OR52K2Q8NGK3 314 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 STYXQ8WUJ0 223 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 STON2Q8WXE9 905 aa19.56■□□□□ 0.72
HOXC4-201ENST00000303406 TRIM43Q96BQ3 446 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms