RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 CCDC80Q76M96 950 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 RASGEF1AQ8N9B8 481 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 ATXN2LQ8WWM7 1075 aaKnown RBP10.46□□□□□ -0.73
CLIP1-201ENST00000302528 ZNF607Q96SK3 696 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 PLAGL2Q9UPG8 496 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 ZNF780BQ9Y6R6 833 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 OR14I1A6ND48 311 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 ISM1B1AKI9 464 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 H0Y858 1186 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 GATBO75879 557 aaKnown RBP10.46□□□□□ -0.74
CLIP1-201ENST00000302528 PSMG1O95456 288 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 CST1P01037 141 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 PRH1P02810 166 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 RAB27AP51159 221 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 TUBB3Q13509 450 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 AP5B1Q2VPB7 878 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 WDR93Q6P2C0 686 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 HHIPL2Q6UWX4 724 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 PTCHD4Q6ZW05 846 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 USP49Q70CQ1 688 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 JAZF1Q86VZ6 243 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 ZDHHC17Q8IUH5 632 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 NKAPQ8N5F7 415 aaKnown RBP10.46□□□□□ -0.74
CLIP1-201ENST00000302528 DGCR14Q96DF8 476 aaKnown RBP10.46□□□□□ -0.74
CLIP1-201ENST00000302528 OSMRQ99650 979 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 ACE2Q9BYF1 805 aaPredicted RBP10.46□□□□□ -0.74
CLIP1-201ENST00000302528 TMEM39BQ9GZU3 492 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 IL25Q9H293 177 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 ZFP14Q9HCL3 533 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 OSGEPQ9NPF4 335 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 TMCO1Q9UM00 188 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 SAMHD1Q9Y3Z3 626 aaKnown RBP10.46□□□□□ -0.74
CLIP1-201ENST00000302528 PCDHGB3Q9Y5G1 929 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 LOC110117498-PIK3R3F6TDL0 507 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 KCNK1O00180 336 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 FFAR3O14843 346 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 GPR42O15529 346 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 IGFBP4P22692 258 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 SSTR1P30872 391 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 GMPSP49915 693 aaPredicted RBP10.46□□□□□ -0.74
CLIP1-201ENST00000302528 FAM91A1Q658Y4 838 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 AKAP14Q86UN6 197 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 RASAL3Q86YV0 1011 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 FBXO16Q8IX29 292 aaPredicted RBP10.46□□□□□ -0.74
CLIP1-201ENST00000302528 CHST4Q8NCG5 386 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 TSEN15Q8WW01 171 aaKnown RBP10.46□□□□□ -0.74
CLIP1-201ENST00000302528 C11orf24Q96F05 449 aaPredicted RBP10.46□□□□□ -0.74
CLIP1-201ENST00000302528 MARK4Q96L34 752 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 CITED4Q96RK1 184 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 TTYH1Q9H313 450 aaPredicted RBP10.46□□□□□ -0.74
CLIP1-201ENST00000302528 SEMA4AQ9H3S1 761 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 SNTG2Q9NY99 539 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 RAPGEFL1Q9UHV5 662 aa10.46□□□□□ -0.74
CLIP1-201ENST00000302528 MRTO4Q9UKD2 239 aaKnown RBP10.46□□□□□ -0.74
CLIP1-201ENST00000302528 MTF2Q9Y483 593 aaPredicted RBP10.46□□□□□ -0.74
CLIP1-201ENST00000302528 MRPL42Q9Y6G3 142 aaKnown RBP10.46□□□□□ -0.74
CLIP1-201ENST00000302528 USP42Q9H9J4 1324 aaKnown RBP10.46□□□□□ -0.74
CLIP1-201ENST00000302528 PPP1R3GB7ZBB8 358 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 CXCL8P10145 99 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 HOXC12P31275 282 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 DNASE1L1P49184 302 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 KYAT3Q6YP21 454 aaKnown RBP10.45□□□□□ -0.74
CLIP1-201ENST00000302528 RTL4Q6ZR62 310 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 DNAJB14Q8TBM8 379 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 PTCD3Q96EY7 689 aaKnown RBP10.45□□□□□ -0.74
CLIP1-201ENST00000302528 PPP3R2Q96LZ3 170 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 FDXACB1Q9BRP7 624 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-201ENST00000302528 DEFB129Q9H1M3 183 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 ASB8Q9H765 288 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 PNPLA8Q9NP80 782 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 MYOZ2Q9NPC6 264 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 EURLQ9NYK6 297 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 BARX2Q9UMQ3 279 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-201ENST00000302528 CAMSAP1Q5T5Y3 1602 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 SLC28A2O43868 658 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 SNAP91O60641 907 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 CBFA2T3O75081 653 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 LTA4HP09960 611 aaKnown RBP10.45□□□□□ -0.74
CLIP1-201ENST00000302528 THRBP10828 461 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 PAX7P23759 505 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 FAAP100Q0VG06 881 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 IL18Q14116 193 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 STXBP5Q5T5C0 1151 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 CHST15Q7LFX5 561 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-201ENST00000302528 ZNF433Q8N7K0 673 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-201ENST00000302528 PIK3C3Q8NEB9 887 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 FAM81AQ8TBF8 368 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 ADAM32Q8TC27 787 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 TAS1R2Q8TE23 839 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 ZNF75CPQ92670 426 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-201ENST00000302528 COL3A1P02461 1466 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-201ENST00000302528 IRGMA1A4Y4 181 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 HACD1B0YJ81 288 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 C9P02748 559 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 ICAM1P05362 532 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 CDK9P50750 372 aaKnown RBP10.45□□□□□ -0.74
CLIP1-201ENST00000302528 SQLEQ14534 574 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 C12orf56Q8IXR9 622 aa10.45□□□□□ -0.74
CLIP1-201ENST00000302528 TEFMQ96QE5 360 aaKnown RBP10.45□□□□□ -0.74
CLIP1-201ENST00000302528 AIFM2Q9BRQ8 373 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms