RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 LGMNQ99538 433 aa18.42■□□□□ 0.54
SPSB3-201ENST00000301717 OSBPL1AQ9BXW6 950 aa18.42■□□□□ 0.54
SPSB3-201ENST00000301717 KDM4CQ9H3R0 1056 aa18.42■□□□□ 0.54
SPSB3-201ENST00000301717 NT5MQ9NPB1 228 aa18.42■□□□□ 0.54
SPSB3-201ENST00000301717 SAE1Q9UBE0 346 aaPredicted RBP18.42■□□□□ 0.54
SPSB3-201ENST00000301717 PSTPIP1O43586 416 aa18.41■□□□□ 0.54
SPSB3-201ENST00000301717 CDKN2BP42772 138 aa18.41■□□□□ 0.54
SPSB3-201ENST00000301717 ATXN3P54252 364 aaPredicted RBP18.41■□□□□ 0.54
SPSB3-201ENST00000301717 GSDMDP57764 484 aa18.41■□□□□ 0.54
SPSB3-201ENST00000301717 ODF2Q5BJF6 829 aa18.41■□□□□ 0.54
SPSB3-201ENST00000301717 SPOCD1Q6ZMY3 1216 aa18.41■□□□□ 0.54
SPSB3-201ENST00000301717 TTC7BQ86TV6 843 aa18.41■□□□□ 0.54
SPSB3-201ENST00000301717 TRIM69Q86WT6 500 aa18.41■□□□□ 0.54
SPSB3-201ENST00000301717 HORMAD1Q86X24 394 aa18.41■□□□□ 0.54
SPSB3-201ENST00000301717 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.41■□□□□ 0.54
SPSB3-201ENST00000301717 ZNF599Q96NL3 588 aa18.41■□□□□ 0.54
SPSB3-201ENST00000301717 CPEB1Q9BZB8 566 aaKnown RBP18.41■□□□□ 0.54
SPSB3-201ENST00000301717 SUV39H2Q9H5I1 410 aa18.41■□□□□ 0.54
SPSB3-201ENST00000301717 CAAP1Q9H8G2 361 aa18.41■□□□□ 0.54
SPSB3-201ENST00000301717 DDX56Q9NY93 547 aaKnown RBP18.41■□□□□ 0.54
SPSB3-201ENST00000301717 DOCK9Q9BZ29 2069 aa18.41■□□□□ 0.54
SPSB3-201ENST00000301717 CNOT1A5YKK6 2376 aaKnown RBP18.41■□□□□ 0.54
SPSB3-201ENST00000301717 BTNL10A8MVZ5 291 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 H0Y8X5 98 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 APOL1O14791 398 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 KCNA4P22459 653 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 MMP13P45452 471 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 LIMK1P53667 647 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 RACK1P63244 317 aaKnown RBP18.4■□□□□ 0.54
SPSB3-201ENST00000301717 AADACL2Q6P093 401 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 ADAT2Q7Z6V5 191 aaKnown RBP18.4■□□□□ 0.54
SPSB3-201ENST00000301717 PRPF39Q86UA1 669 aaKnown RBP18.4■□□□□ 0.54
SPSB3-201ENST00000301717 LRRC57Q8N9N7 239 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 CCNYQ8ND76 341 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 HAUS1Q96CS2 278 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 HERPUD2Q9BSE4 406 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 MAK16Q9BXY0 300 aaKnown RBP18.4■□□□□ 0.54
SPSB3-201ENST00000301717 CEP41Q9BYV8 373 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 NOD2Q9HC29 1040 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 ANKRD6Q9Y2G4 727 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 PCDHGC4Q9Y5F7 938 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 ADGRG1Q9Y653 693 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 A0A1W2PR77 199 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 IGLON5A6NGN9 336 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 KCNK1O00180 336 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 NEMP1O14524 444 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 AREL1O15033 823 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 RAD51BO15315 384 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 PECAM1P16284 738 aaPredicted RBP18.4■□□□□ 0.54
SPSB3-201ENST00000301717 CR2P20023 1033 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 GRIA4P48058 902 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 CSNK1DP48730 415 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 CLDN2P57739 230 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 IHHQ14623 411 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 PTPRRQ15256 657 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 IFI16Q16666 785 aaKnown RBP18.4■□□□□ 0.54
SPSB3-201ENST00000301717 TMEM259Q4ZIN3 620 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 MARC1Q5VT66 337 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 CCDC50Q8IVM0 306 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 KATNAL2Q8IYT4 538 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 MGME1Q9BQP7 344 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 WRAP53Q9BUR4 548 aaKnown RBP18.4■□□□□ 0.54
SPSB3-201ENST00000301717 HEMGNQ9BXL5 484 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 ATP13A3Q9H7F0 1226 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 PACSIN2Q9UNF0 486 aaPredicted RBP18.4■□□□□ 0.54
SPSB3-201ENST00000301717 FNDC3AQ9Y2H6 1198 aaKnown RBP18.4■□□□□ 0.54
SPSB3-201ENST00000301717 TTLL3Q9Y4R7 772 aa18.4■□□□□ 0.54
SPSB3-201ENST00000301717 GOLGA6L3A6NEY3 463 aa18.39■□□□□ 0.53
SPSB3-201ENST00000301717 TRAFD1O14545 582 aaPredicted RBP18.39■□□□□ 0.53
SPSB3-201ENST00000301717 TM4SF5O14894 197 aa18.39■□□□□ 0.53
SPSB3-201ENST00000301717 AP1G1O43747 822 aa18.39■□□□□ 0.53
SPSB3-201ENST00000301717 CST8O60676 142 aa18.39■□□□□ 0.53
SPSB3-201ENST00000301717 MMP20O60882 483 aa18.39■□□□□ 0.53
SPSB3-201ENST00000301717 FTCDO95954 541 aa18.39■□□□□ 0.53
SPSB3-201ENST00000301717 PAK4O96013 591 aaPredicted RBP18.39■□□□□ 0.53
SPSB3-201ENST00000301717 SYPP08247 313 aa18.39■□□□□ 0.53
SPSB3-201ENST00000301717 IL9RQ01113 521 aa18.39■□□□□ 0.53
SPSB3-201ENST00000301717 BCL2L1Q07817 233 aa18.39■□□□□ 0.53
SPSB3-201ENST00000301717 ITKQ08881 620 aa18.39■□□□□ 0.53
SPSB3-201ENST00000301717 NSUN2Q08J23 767 aaKnown RBP eCLIP18.39■□□□□ 0.53
SPSB3-201ENST00000301717 CCDC15Q0P6D6 951 aa18.39■□□□□ 0.53
SPSB3-201ENST00000301717 KIF5AQ12840 1032 aa18.39■□□□□ 0.53
SPSB3-201ENST00000301717 PUM1Q14671 1186 aaKnown RBP eCLIP18.39■□□□□ 0.53
SPSB3-201ENST00000301717 TAZQ16635 292 aa18.39■□□□□ 0.53
SPSB3-201ENST00000301717 HLA-BQ31612 363 aa18.39■□□□□ 0.53
SPSB3-201ENST00000301717 SETMARQ53H47 684 aaPredicted RBP18.39■□□□□ 0.53
SPSB3-201ENST00000301717 NAPEPLDQ6IQ20 393 aa18.39■□□□□ 0.53
SPSB3-201ENST00000301717 TEX26Q8N6G2 289 aa18.39■□□□□ 0.53
SPSB3-201ENST00000301717 NSMCE1Q8WV22 266 aa18.39■□□□□ 0.53
SPSB3-201ENST00000301717 MAML1Q92585 1016 aa18.39■□□□□ 0.53
SPSB3-201ENST00000301717 GAREM1Q9H706 876 aa18.39■□□□□ 0.53
SPSB3-201ENST00000301717 PCDH12Q9NPG4 1184 aa18.39■□□□□ 0.53
SPSB3-201ENST00000301717 SCUBE2Q9NQ36 999 aa18.39■□□□□ 0.53
SPSB3-201ENST00000301717 COQ6Q9Y2Z9 468 aa18.39■□□□□ 0.53
SPSB3-201ENST00000301717 CAPN6Q9Y6Q1 641 aa18.39■□□□□ 0.53
SPSB3-201ENST00000301717 SHROOM3Q8TF72 1996 aa18.39■□□□□ 0.53
SPSB3-201ENST00000301717 ASCC3Q8N3C0 2202 aaKnown RBP18.38■□□□□ 0.53
SPSB3-201ENST00000301717 CACNA1AO00555 2505 aa18.38■□□□□ 0.53
SPSB3-201ENST00000301717 hCG_1818297A0A087WSY0 165 aa18.38■□□□□ 0.53
SPSB3-201ENST00000301717 TSPAN11A1L157 253 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms