RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 CTNNB1P35222 781 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 IFNGR2P38484 337 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 POLR2LP62875 67 aaKnown RBP13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 MYBPC1Q00872 1141 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PAGE2BQ5JRK9 111 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 MIIPQ5JXC2 388 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 FAM171BQ6P995 826 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ANKS1BQ7Z6G8 1248 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ZNF540Q8NDQ6 660 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PNPOQ9NVS9 261 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ZMYND8Q9ULU4 1186 aaPredicted RBP13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 OR10H1Q9Y4A9 318 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 MSI1O43347 362 aaKnown RBP13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CYP1A2P05177 515 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 TUFMP49411 452 aaKnown RBP13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 AMPD2Q01433 879 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 FBXO48Q5FWF7 155 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ARMC3Q5W041 872 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ZPBP2Q6X784 338 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 IL31RAQ8NI17 732 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SLC9A7Q96T83 725 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CRISPLD1Q9H336 500 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 KCNK4Q9NYG8 393 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 STON1Q9Y6Q2 735 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 UMODL1Q5DID0 1318 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 FOXO6A8MYZ6 492 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ENTPD5O75356 428 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SNRPB2P08579 225 aaKnown RBP13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 COPZ1P61923 177 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 USP46P62068 366 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 IKBKEQ14164 716 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 GNA13Q14344 377 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 AGMOQ6ZNB7 445 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SCAIQ8N9R8 606 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 STAG3L4Q8TBR4 150 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 BRD9Q9H8M2 597 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 FAM198AQ9UFP1 575 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 YDJCA8MPS7 323 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 NR2F1P10589 423 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CPSF6Q16630 551 aaKnown RBP eCLIP13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CXorf40BQ96DE9 158 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ZFRQ96KR1 1074 aaKnown RBP13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 MTMR9Q96QG7 549 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 GALNT8Q9NY28 637 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ANGPT4Q9Y264 503 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CST1P01037 141 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 BUD31P41223 144 aaPredicted RBP13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SQLEQ14534 574 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ECM1Q16610 540 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PTPRNQ16849 979 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 GALNT5Q7Z7M9 940 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 DENND6AQ8IWF6 608 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ADHFE1Q8IWW8 467 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 BAP1Q92560 729 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 AASDHPPTQ9NRN7 309 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 TRBV23OR9-2A0A075B6M9 112 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ISM1B1AKI9 464 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ETS2P15036 469 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ZNF143P52747 638 aaPredicted RBP13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 RABGGTBP53611 331 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PRKAA2P54646 552 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 MRPS6P82932 125 aaKnown RBP13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 USP4Q13107 963 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 TARBP2Q15633 366 aaKnown RBP13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 HECTD3Q5T447 861 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 NT5DC1Q5TFE4 455 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PIGZQ86VD9 579 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 RCN3Q96D15 328 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 LINGO1Q96FE5 620 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ACO2Q99798 780 aaKnown RBP13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 MTFR1LQ9H019 292 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 GOLGA2P5Q9HBQ8 144 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PPP2R3BQ9Y5P8 575 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 U3KQV3 271 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ASTN2O75129 1339 aaPredicted RBP13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SNUPNO95149 360 aaKnown RBP13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 HGFP14210 728 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 TCEA1P23193 301 aaKnown RBP13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PTPN5P54829 565 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 INO80DQ53TQ3 878 aaPredicted RBP13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ZNF549Q6P9A3 640 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SERPINA13PQ6UXR4 307 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CCDC185Q8N715 623 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 VANGL1Q8TAA9 524 aaPredicted RBP13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 NELL1Q92832 810 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ZYG11BQ9C0D3 744 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 EQTNQ9NQ60 294 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 OSER1Q9NX31 292 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PLK2Q9NYY3 685 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PTGFRNQ9P2B2 879 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ERBB2P04626 1255 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CDK7P50613 346 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SNRPD1P62314 119 aaKnown RBP13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ZFP1Q6P2D0 407 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SMYD1Q8NB12 490 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PSMA8Q8TAA3 256 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 MRPL9Q9BYD2 267 aaKnown RBP13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 LRCH1Q9Y2L9 728 aa13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ARIH1Q9Y4X5 557 aaPredicted RBP13.66□□□□□ -0.22
CHRFAM7A-201ENST00000299847 FAM25EA8MYX2 175 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms