RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 CCDC117Q8IWD4 279 aaPredicted RBP25.89■■□□□ 1.74
SDCCAG3-201ENST00000298537 TMEM216Q9P0N5 145 aa25.89■■□□□ 1.74
SDCCAG3-201ENST00000298537 SEPT3Q9UH03 358 aa25.89■■□□□ 1.74
SDCCAG3-201ENST00000298537 GGA2Q9UJY4 613 aa25.89■■□□□ 1.74
SDCCAG3-201ENST00000298537 IRAK3Q9Y616 596 aa25.89■■□□□ 1.74
SDCCAG3-201ENST00000298537 ARL5AQ9Y689 179 aa25.89■■□□□ 1.74
SDCCAG3-201ENST00000298537 MT-CO1P00395 513 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 EPCAMP16422 314 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 NTHL1P78549 312 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 TMPRSS15P98073 1019 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 ITIH4Q14624 930 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 TSTD2Q5T7W7 516 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 ZNF697Q5TEC3 545 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 ZCCHC23Q6ZST2 131 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 LDB1Q86U70 411 aaPredicted RBP25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 BLOC1S5Q8TDH9 187 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 CCT6BQ92526 530 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 EMILIN2Q9BXX0 1053 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 TLR9Q9NR96 1032 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 SLC39A10Q9ULF5 831 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 REV3LO60673 3130 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 PER2O15055 1255 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 ZMPSTE24O75844 475 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 NEFHP12036 1026 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 AVPR1AP37288 418 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 ZNF460Q14592 562 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 PPM1LQ5SGD2 360 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 ZNF470Q6ECI4 717 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 APCDD1Q8J025 514 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 SHKBP1Q8TBC3 707 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 IFT43Q96FT9 208 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 FEM1AQ9BSK4 669 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 SUDS3Q9H7L9 328 aaPredicted RBP25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 MRM3Q9HC36 420 aaKnown RBP25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 ASAH2Q9NR71 780 aa25.88■■□□□ 1.73
SDCCAG3-201ENST00000298537 A0A0U1RQS6 177 aa25.87■■□□□ 1.73
SDCCAG3-201ENST00000298537 K7ERQ8 282 aa25.87■■□□□ 1.73
SDCCAG3-201ENST00000298537 PDHA1P08559 390 aa25.87■■□□□ 1.73
SDCCAG3-201ENST00000298537 CR2P20023 1033 aa25.87■■□□□ 1.73
SDCCAG3-201ENST00000298537 MAGEA12P43365 314 aa25.87■■□□□ 1.73
SDCCAG3-201ENST00000298537 SLC5A9Q2M3M2 681 aa25.87■■□□□ 1.73
SDCCAG3-201ENST00000298537 ALG1LQ6GMV1 187 aa25.87■■□□□ 1.73
SDCCAG3-201ENST00000298537 ANKS4BQ8N8V4 417 aa25.87■■□□□ 1.73
SDCCAG3-201ENST00000298537 TRIB3Q96RU7 358 aa25.87■■□□□ 1.73
SDCCAG3-201ENST00000298537 MAN1C1Q9NR34 630 aa25.87■■□□□ 1.73
SDCCAG3-201ENST00000298537 STARD13Q9Y3M8 1113 aa25.87■■□□□ 1.73
SDCCAG3-201ENST00000298537 PCDHGC4Q9Y5F7 938 aa25.87■■□□□ 1.73
SDCCAG3-201ENST00000298537 OR51B4Q9Y5P0 310 aa25.87■■□□□ 1.73
SDCCAG3-201ENST00000298537 HEATR9A2RTY3 570 aa25.87■■□□□ 1.73
SDCCAG3-201ENST00000298537 LEFTY2O00292 366 aa25.87■■□□□ 1.73
SDCCAG3-201ENST00000298537 PHGDHO43175 533 aaKnown RBP25.87■■□□□ 1.73
SDCCAG3-201ENST00000298537 LDB2O43679 373 aa25.87■■□□□ 1.73
SDCCAG3-201ENST00000298537 LUC7L3O95232 432 aaKnown RBP25.87■■□□□ 1.73
SDCCAG3-201ENST00000298537 DDI1Q8WTU0 396 aa25.87■■□□□ 1.73
SDCCAG3-201ENST00000298537 DDX50Q9BQ39 737 aaKnown RBP25.87■■□□□ 1.73
SDCCAG3-201ENST00000298537 C20orf27Q9GZN8 174 aa25.87■■□□□ 1.73
SDCCAG3-201ENST00000298537 VPS28Q9UK41 221 aa25.87■■□□□ 1.73
SDCCAG3-201ENST00000298537 FCF1Q9Y324 198 aaKnown RBP25.87■■□□□ 1.73
SDCCAG3-201ENST00000298537 PRRC2BQ5JSZ5 2229 aaKnown RBP25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 MOSPD3O75425 235 aa25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 HAUS5O94927 633 aa25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 SERPINF2P08697 491 aa25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 SLC7A9P82251 487 aa25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 KIAA0930Q6ICG6 404 aaPredicted RBP25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 SLC41A1Q8IVJ1 513 aa25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 CNTN4Q8IWV2 1026 aa25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 HJURPQ8NCD3 748 aaPredicted RBP25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 PTCD2Q8WV60 388 aaKnown RBP25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 ALG14Q96F25 216 aa25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 NPHS2Q9NP85 383 aa25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 FBXO6Q9NRD1 293 aaPredicted RBP25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 DNMT3BQ9UBC3 853 aaKnown RBP25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 SH3BP1Q9Y3L3 701 aa25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 CCT8L1PA6NM43 557 aa25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 DNAJC6O75061 913 aa25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 TMCC1O94876 653 aa25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 C2P06681 752 aa25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 CDH18Q13634 790 aa25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 CHI3L2Q15782 390 aa25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 C9orf50Q5SZB4 431 aa25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 PTAR1Q7Z6K3 402 aaPredicted RBP25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 SPATS2Q86XZ4 545 aaKnown RBP25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 TDRD5Q8NAT2 981 aaKnown RBP25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 ACMSDQ8TDX5 336 aa25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 ISL2Q96A47 359 aa25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 STK39Q9UEW8 545 aa25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 SPO11Q9Y5K1 396 aa25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 HCFC2Q9Y5Z7 792 aa25.86■■□□□ 1.73
SDCCAG3-201ENST00000298537 A0A096LPK6 155 aa25.85■■□□□ 1.73
SDCCAG3-201ENST00000298537 MROH6A6NGR9 719 aa25.85■■□□□ 1.73
SDCCAG3-201ENST00000298537 PLIN3O60664 434 aa25.85■■□□□ 1.73
SDCCAG3-201ENST00000298537 KIAA0754O94854 1291 aa25.85■■□□□ 1.73
SDCCAG3-201ENST00000298537 PRLP01236 227 aa25.85■■□□□ 1.73
SDCCAG3-201ENST00000298537 KCNA4P22459 653 aa25.85■■□□□ 1.73
SDCCAG3-201ENST00000298537 SERPINB8P50452 374 aa25.85■■□□□ 1.73
SDCCAG3-201ENST00000298537 CSE1LP55060 971 aaKnown RBP25.85■■□□□ 1.73
SDCCAG3-201ENST00000298537 TEAD2Q15562 447 aa25.85■■□□□ 1.73
SDCCAG3-201ENST00000298537 FAM217AQ8IXS0 508 aa25.85■■□□□ 1.73
SDCCAG3-201ENST00000298537 TNS4Q8IZW8 715 aa25.85■■□□□ 1.73
SDCCAG3-201ENST00000298537 ELMOD1Q8N336 334 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms