RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 FAM187BQ17R55 369 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 TBC1D25Q3MII6 688 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 ZNF786Q8N393 782 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 CCDC185Q8N715 623 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 C2orf15Q8WU43 125 aaKnown RBP6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 PRCCQ92733 491 aaPredicted RBP6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 GTPBP2Q9BX10 602 aaKnown RBP6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 ZCCHC17Q9NP64 241 aaKnown RBP6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 ALKBH4Q9NXW9 302 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 TAGLN3Q9UI15 199 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 PCDHGC5Q9Y5F6 944 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 IRS2Q9Y4H2 1338 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 SLC28A1O00337 649 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 CHADO15335 359 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 PHGDHO43175 533 aaKnown RBP6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 TSPAN1O60635 241 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 PEX10O60683 326 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 ATG13O75143 517 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 FGF1P05230 155 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 GLI1P08151 1106 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 TACR2P21452 398 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 STX4Q12846 297 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 CCL14Q16627 93 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 PARP15Q460N3 678 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 HYIQ5T013 277 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 PRSS55Q6UWB4 352 aaPredicted RBP6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 NEK10Q6ZWH5 1172 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 OTOP3Q7RTS5 596 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 EID3Q8N140 333 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 ARL14EPQ8N8R7 260 aaPredicted RBP6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 NOA1Q8NC60 698 aaKnown RBP6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 GPR156Q8NFN8 814 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 MYCBPAPQ8TBZ2 947 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 NSMCE2Q96MF7 247 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 C10orf88Q9H8K7 445 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 NEUROD4Q9HD90 331 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 ARHGEF4Q9NR80 690 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 MAT2BQ9NZL9 334 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 TMEM216Q9P0N5 145 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 HBS1LQ9Y450 684 aaKnown RBP6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 PCDHB11Q9Y5F2 797 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 TMEM191CA6NGB0 347 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 RGS5O15539 181 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 SCN2BO60939 215 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 ERAL1O75616 437 aaKnown RBP6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 ATG7O95352 703 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 CCDC166P0CW27 439 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 RPIAP49247 311 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 RAD23AP54725 363 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 NAA30Q147X3 362 aaPredicted RBP6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 CDKAL1Q5VV42 579 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 ANKS1BQ7Z6G8 1248 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 KIF2BQ8N4N8 673 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 OR4L1Q8NH43 312 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 LIMD1Q9UGP4 676 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 EVLQ9UI08 416 aaPredicted RBP6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 CROTQ9UKG9 612 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 INVSQ9Y283 1065 aa6.97□□□□□ -1.29
GAPVD1-202ENST00000297933 ABHD14A-ACY1A0A1B0GW23 586 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 SLC38A8A6NNN8 435 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 DDX3XO00571 662 aaKnown RBP eCLIP6.96□□□□□ -1.295e-8■■□□□ 13.6
GAPVD1-202ENST00000297933 CD3EAPO15446 510 aaKnown RBP6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 PECAM1P16284 738 aaPredicted RBP6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 MASP1P48740 699 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 CXCR3P49682 368 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 CDK7P50613 346 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 BLKP51451 505 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 CASP5P51878 434 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 LRRC32Q14392 662 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 CEP78Q5JTW2 689 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 CHSY3Q70JA7 882 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 ZC3H7AQ8IWR0 971 aaKnown RBP6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 LRRC34Q8IZ02 419 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 OR52L1Q8NGH7 329 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 PLD4Q96BZ4 506 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 INPP4AQ96PE3 977 aaPredicted RBP6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 SEPHS2Q99611 448 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 ZNF670Q9BS34 389 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 WRAP53Q9BUR4 548 aaKnown RBP6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 KCNN2Q9H2S1 579 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 PCDH12Q9NPG4 1184 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 KLC4Q9NSK0 619 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 MORF4L1Q9UBU8 362 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 CPQQ9Y646 472 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 KCNE2Q9Y6J6 123 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 ZFP37Q9Y6Q3 630 aaPredicted RBP6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 ASTN1O14525 1302 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 MCIDASD6RGH6 385 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 HSMCR30P0CW71 290 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 RPL17P18621 184 aaKnown RBP6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 ADRA1DP25100 572 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 GDI1P31150 447 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 POLD2P49005 469 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 CYP4F8P98187 520 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 SUZ12Q15022 739 aaKnown RBP6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 UAP1L1Q3KQV9 507 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 TBCELQ5QJ74 424 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 VARS2Q5ST30 1063 aaKnown RBP6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 INTS11Q5TA45 600 aaKnown RBP6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms