RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 TM6SF2Q9BZW4 377 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 ABCG4Q9H172 646 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 ZDHHC6Q9H6R6 413 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 SYNCQ9H7C4 482 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 POLR1BQ9H9Y6 1135 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 SATB2Q9UPW6 733 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 ENTPD2Q9Y5L3 495 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 ARHGEF17Q96PE2 2063 aaPredicted RBP9.44□□□□□ -0.9
CNOT9-202ENST00000295701 PIEZO2Q9H5I5 2752 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 SPTY2D1-AS1A0A0U1RR47 76 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 ILVBLA1L0T0 632 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 NEMP2A6NFY4 417 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 C16orf96A6NNT2 1141 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 MUSKO15146 869 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 GCATO75600 419 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 GJB6O95452 261 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 FGFR1OPO95684 399 aaKnown RBP9.44□□□□□ -0.9
CNOT9-202ENST00000295701 CELA2BP08218 269 aaPredicted RBP9.44□□□□□ -0.9
CNOT9-202ENST00000295701 ALPPL2P10696 532 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 NME1P15531 152 aaKnown RBP9.44□□□□□ -0.9
CNOT9-202ENST00000295701 ITGB7P26010 798 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 RECQLP46063 649 aaPredicted RBP9.44□□□□□ -0.9
CNOT9-202ENST00000295701 GABRB2P47870 512 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 SERPINH1P50454 418 aaKnown RBP9.44□□□□□ -0.9
CNOT9-202ENST00000295701 RNF144AP50876 292 aaPredicted RBP9.44□□□□□ -0.9
CNOT9-202ENST00000295701 HNRNPKP61978 463 aaKnown RBP eCLIP9.44□□□□□ -0.9
CNOT9-202ENST00000295701 RPS21P63220 83 aaKnown RBP9.44□□□□□ -0.9
CNOT9-202ENST00000295701 CCDC15Q0P6D6 951 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 TCEA2Q15560 299 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 CAMK4Q16566 473 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 ISXQ2M1V0 245 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 SLC25A52Q3SY17 297 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 HSP90AA4PQ58FG1 418 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 FOXR1Q6PIV2 292 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 LRRC31Q6UY01 552 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 KYAT3Q6YP21 454 aaKnown RBP9.44□□□□□ -0.9
CNOT9-202ENST00000295701 FAM71AQ8IYT1 594 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 KCNE4Q8WWG9 221 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 C18orf8Q96DM3 657 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 IFT43Q96FT9 208 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 FAM81BQ96LP2 452 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 CFAP57Q96MR6 1250 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 ATP13A1Q9HD20 1204 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 RRN3Q9NYV6 651 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 IPO11Q9UI26 975 aaKnown RBP9.44□□□□□ -0.9
CNOT9-202ENST00000295701 RWDD2AQ9UIY3 292 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 AHCTF1Q8WYP5 2266 aa9.44□□□□□ -0.9
CNOT9-202ENST00000295701 ANKRD36A6QL64 1941 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 GTPBP10A4D1E9 387 aaKnown RBP9.43□□□□□ -0.9
CNOT9-202ENST00000295701 EME2A4GXA9 379 aaPredicted RBP9.43□□□□□ -0.9
CNOT9-202ENST00000295701 FAM72CH0Y354 149 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 MEN1O00255 615 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 AQP9O43315 295 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 GP1BAP07359 652 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 CDH5P33151 784 aaPredicted RBP9.43□□□□□ -0.9
CNOT9-202ENST00000295701 RABIFP47224 123 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 DUSP3P51452 185 aaPredicted RBP9.43□□□□□ -0.9
CNOT9-202ENST00000295701 ADKP55263 362 aaKnown RBP9.43□□□□□ -0.9
CNOT9-202ENST00000295701 TMPRSS3P57727 454 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 ERVPABLB-1P60509 514 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 PFN3P60673 137 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 ATP11AP98196 1134 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 GNA12Q03113 381 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 SGCGQ13326 291 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 MTA1Q13330 715 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 C15orf59Q2T9L4 293 aaPredicted RBP9.43□□□□□ -0.9
CNOT9-202ENST00000295701 ATXN7L2Q5T6C5 722 aaPredicted RBP9.43□□□□□ -0.9
CNOT9-202ENST00000295701 FAM72AQ5TYM5 149 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 BROXQ5VW32 411 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 KIAA1614Q5VZ46 1190 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 FAM72DQ6L9T8 149 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 KIAA1161Q6NSJ0 714 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 PRICKLE2Q7Z3G6 844 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 BNIPLQ7Z465 357 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 FAM72BQ86X60 149 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 DCP2Q8IU60 420 aaKnown RBP9.43□□□□□ -0.9
CNOT9-202ENST00000295701 ZDHHC17Q8IUH5 632 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 SLC35F3Q8IY50 421 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 LSMEM2Q8N112 164 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 RYBPQ8N488 228 aaPredicted RBP9.43□□□□□ -0.9
CNOT9-202ENST00000295701 PCDH20Q8N6Y1 951 aaKnown RBP9.43□□□□□ -0.9
CNOT9-202ENST00000295701 EMC1Q8N766 993 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 TMEM35BQ8NCS4 154 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 CPA5Q8WXQ8 436 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 TTC9Q92623 222 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 PPP1R16AQ96I34 528 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 SLC46A1Q96NT5 459 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 LENG8Q96PV6 779 aaPredicted RBP9.43□□□□□ -0.9
CNOT9-202ENST00000295701 HAPLN3Q96S86 360 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 DUSP23Q9BVJ7 150 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 CEP44Q9C0F1 390 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 CLPBQ9H078 707 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 PDCL3Q9H2J4 239 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 MBNL1Q9NR56 388 aaKnown RBP9.43□□□□□ -0.9
CNOT9-202ENST00000295701 DNAI1Q9UI46 699 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 TMEM59LQ9UK28 342 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 STAP1Q9ULZ2 295 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 FHOD1Q9Y613 1164 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 SCN8AQ9UQD0 1980 aa9.43□□□□□ -0.9
CNOT9-202ENST00000295701 FPGTO14772 594 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms