RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 SLC25A23Q9BV35 468 aa17.42■□□□□ 0.38
SHANK1-201ENST00000293441 COG5Q9UP83 839 aa17.42■□□□□ 0.38
SHANK1-201ENST00000293441 CAPN1P07384 714 aa17.42■□□□□ 0.38
SHANK1-201ENST00000293441 LAG3P18627 525 aa17.42■□□□□ 0.38
SHANK1-201ENST00000293441 FGFR3P22607 806 aa17.42■□□□□ 0.38
SHANK1-201ENST00000293441 ME2P23368 584 aa17.42■□□□□ 0.38
SHANK1-201ENST00000293441 NOMO3P69849 1222 aa17.42■□□□□ 0.38
SHANK1-201ENST00000293441 TUSC3Q13454 348 aa17.42■□□□□ 0.38
SHANK1-201ENST00000293441 DDHD1Q8NEL9 900 aa17.42■□□□□ 0.38
SHANK1-201ENST00000293441 CNGB3Q9NQW8 809 aa17.42■□□□□ 0.38
SHANK1-201ENST00000293441 CLPTM1O96005 669 aa17.42■□□□□ 0.38
SHANK1-201ENST00000293441 PRKCIP41743 596 aa17.42■□□□□ 0.38
SHANK1-201ENST00000293441 TATDN1Q6P1N9 297 aa17.42■□□□□ 0.38
SHANK1-201ENST00000293441 CPA6Q8N4T0 437 aa17.42■□□□□ 0.38
SHANK1-201ENST00000293441 KLHL23Q8NBE8 558 aa17.42■□□□□ 0.38
SHANK1-201ENST00000293441 KLHL5Q96PQ7 755 aa17.42■□□□□ 0.38
SHANK1-201ENST00000293441 TRIM24O15164 1050 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 ASGR1P07306 291 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 MON1AQ86VX9 555 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 UXS1Q8NBZ7 420 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 FLCNQ8NFG4 579 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 KCTD4Q8WVF5 259 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 FAM84AQ96KN4 292 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 SH3GL3Q99963 347 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 SPRTNQ9H040 489 aaPredicted RBP17.41■□□□□ 0.38
SHANK1-201ENST00000293441 PIPSLA2A3N6 862 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 KLRC4O43908 158 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 USP2O75604 605 aaPredicted RBP17.41■□□□□ 0.38
SHANK1-201ENST00000293441 CLK3P49761 638 aaKnown RBP17.41■□□□□ 0.38
SHANK1-201ENST00000293441 HK2P52789 917 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 TERB1Q8NA31 727 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 LRRN4CLQ8ND94 238 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 GMIPQ9P107 970 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 SMIM31A0A1B0GVY4 71 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 URADA6NGE7 173 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 CACNB4O00305 520 aaPredicted RBP17.41■□□□□ 0.38
SHANK1-201ENST00000293441 MYL12BO14950 172 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 ATP12AP54707 1039 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 TRIM32Q13049 653 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 AP5B1Q2VPB7 878 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 C7orf61Q8IZ16 206 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 SCAIQ8N9R8 606 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 TMEM216Q9P0N5 145 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 GPN3Q9UHW5 284 aaPredicted RBP17.41■□□□□ 0.38
SHANK1-201ENST00000293441 ENOPH1Q9UHY7 261 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 ASF1AQ9Y294 204 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 RIPK3Q9Y572 518 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 PAPSS1O43252 624 aaPredicted RBP17.41■□□□□ 0.38
SHANK1-201ENST00000293441 MLYCDO95822 493 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 ITGAVP06756 1048 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 RAB10P61026 200 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 CTBP1Q13363 440 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 ABHD15Q6UXT9 468 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 RASAL3Q86YV0 1011 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 REEP1Q9H902 201 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 QSOX1O00391 747 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 PEX10O60683 326 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 FGBP02675 491 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 PROCP04070 461 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 ANXA6P08133 673 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 WASP42768 502 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 GRIA4P48058 902 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 NAGLUP54802 743 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 TAF10Q12962 218 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 ZNF605Q86T29 641 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 ZNF276Q8N554 614 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 ABCG8Q9H221 673 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 SLC27A6Q9Y2P4 619 aa17.41■□□□□ 0.38
SHANK1-201ENST00000293441 KRT33AO76009 404 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 FGF19O95750 216 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 APODP05090 189 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 SAMD4BQ5PRF9 694 aaKnown RBP17.4■□□□□ 0.38
SHANK1-201ENST00000293441 PSRC1Q6PGN9 363 aaPredicted RBP17.4■□□□□ 0.38
SHANK1-201ENST00000293441 PAGE2Q7Z2X7 111 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 ZFP28Q8NHY6 868 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 RPRD1BQ9NQG5 326 aaKnown RBP17.4■□□□□ 0.38
SHANK1-201ENST00000293441 DERAQ9Y315 318 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 TRIM43BA6NCK2 446 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 PTGES3LE9PB15 166 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 TRIM25Q14258 630 aaKnown RBP17.4■□□□□ 0.38
SHANK1-201ENST00000293441 ZACNQ401N2 412 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 LRRC38Q5VT99 294 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 OR52K2Q8NGK3 314 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 NDRG1Q92597 394 aaKnown RBP17.4■□□□□ 0.38
SHANK1-201ENST00000293441 DTNBP1Q96EV8 351 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 EPB41L4BQ9H329 900 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 GRM6O15303 877 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 CD3EAPO15446 510 aaKnown RBP17.4■□□□□ 0.38
SHANK1-201ENST00000293441 OR6B1O95007 311 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 CBX6O95503 412 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 FAM58BPP0C7Q3 252 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 LRRC55Q6ZSA7 311 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 SLC9A9Q8IVB4 645 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 OR4L1Q8NH43 312 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 HDAC10Q969S8 669 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 LINGO1Q96FE5 620 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 B3GNT5Q9BYG0 378 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 SLITRK2Q9H156 845 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 GLTPD2A6NH11 291 aa17.4■□□□□ 0.38
SHANK1-201ENST00000293441 MDM4O15151 490 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms