RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 FNBP1LQ5T0N5 605 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 NT5DC1Q5TFE4 455 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 ZNF398Q8TD17 642 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 HTRA1Q92743 480 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 MKL1Q969V6 931 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 ITPKCQ96DU7 683 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 MNTQ99583 582 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 MLPHQ9BV36 600 aaPredicted RBP10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 ATP13A1Q9HD20 1204 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 FBXO9Q9UK97 447 aaPredicted RBP10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 ENTPD4Q9Y227 616 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 A0A087X1B8 175 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 H7C4K7 107 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 PGRMC2O15173 223 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 KHDRBS3O75525 346 aaKnown RBP10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 FARP2O94887 1054 aaPredicted RBP10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 WEE1P30291 646 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 CAPGP40121 348 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 TUBP50607 506 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 RAB25P57735 213 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 IRF8Q02556 426 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 SQLEQ14534 574 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 PAGE2Q7Z2X7 111 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 GLT6D1Q7Z4J2 308 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 ILDR1Q86SU0 546 aaPredicted RBP10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 CERS5Q8N5B7 392 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 AP3S1Q92572 193 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 TBL1YQ9BQ87 522 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 GSDMCQ9BYG8 508 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 SSR3Q9UNL2 185 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 TNPO3Q9Y5L0 923 aaKnown RBP10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 DDTLA6NHG4 134 aaPredicted RBP10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 ZBTB14O43829 449 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 TCEA3O75764 348 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 SCGNO76038 276 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 CXCL8P10145 99 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 PTPN3P26045 913 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 MIPP30301 263 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 IL2P60568 153 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 PDK4Q16654 411 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 FBXO47Q5MNV8 452 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 PRAMEF18Q5VWM3 479 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 TMEM53Q6P2H8 277 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 FBXO42Q6P3S6 717 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 CXXC5Q7LFL8 322 aaKnown RBP10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 R3HCC1LQ7Z5L2 792 aaKnown RBP10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 KIAA0895Q8NCT3 520 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 PANX3Q96QZ0 392 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 NKIRAS2Q9NYR9 191 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 OGDHLQ9ULD0 1010 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 EFR3BQ9Y2G0 817 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.82□□□□□ -0.683e-8■■■■■ 40.8
PKNOX1-201ENST00000291547 PCDHGA3Q9Y5H0 932 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 ACTL7BQ9Y614 415 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 IRAK3Q9Y616 596 aa10.82□□□□□ -0.68
PKNOX1-201ENST00000291547 DHRS12A0PJE2 317 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 FAM25EA8MYX2 175 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 LOC110117498-PIK3R3F6TDL0 507 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 STX16-NPEPL1H3BU86 382 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 RBAK-RBAKDNI3L0D1 243 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 STX16O14662 325 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 DHFRP00374 187 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 CST1P01037 141 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 DNAJB2P25686 324 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 OR1E1P30953 314 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 THPOP40225 353 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 CDK9P50750 372 aaKnown RBP10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 NDST1P52848 882 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 COPZ1P61923 177 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 MED22Q15528 200 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 NFE2Q16621 373 aaPredicted RBP10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 ZFP69Q49AA0 526 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 EGFLAMQ63HQ2 1017 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 TUBA3EQ6PEY2 450 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 RASSF6Q6ZTQ3 369 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 AADATQ8N5Z0 425 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 HASPINQ8TF76 798 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 PHF10Q8WUB8 498 aaKnown RBP10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 SLC38A2Q96QD8 506 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 MRIQ9BWK5 157 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 ABCA3Q99758 1704 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 ZNF879B4DU55 563 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 SUPT20HL2P0C7V6 817 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 MYL9P24844 172 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 SREBF1P36956 1147 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 OMPP47874 163 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 AP1S2P56377 157 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 ADIGQ0VDE8 80 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 SNAPC2Q13487 334 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 UBAP2LQ14157 1087 aaKnown RBP10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 CCDC157Q569K6 752 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 FAM220AQ7Z4H9 259 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 NT5DC4Q86YG4 428 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 CCDC36Q8IYA8 594 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 CCDC185Q8N715 623 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 PTGR2Q8N8N7 351 aaPredicted RBP10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 FAM47BQ8NA70 645 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 STAG3L4Q8TBR4 150 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 ELMO3Q96BJ8 720 aa10.81□□□□□ -0.68
PKNOX1-201ENST00000291547 RCN3Q96D15 328 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms