RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 HDAC8Q9BY41 377 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 ISCUQ9H1K1 167 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 OSGEPQ9NPF4 335 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 ETNK2Q9NVF9 386 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 CWC15Q9P013 229 aaKnown RBP9.91□□□□□ -0.82
CCDC58-201ENST00000291458 CTTNBP2NLQ9P2B4 639 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 FTSJ1Q9UET6 329 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 FADS3Q9Y5Q0 445 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 BZW2Q9Y6E2 419 aaKnown RBP9.91□□□□□ -0.82
CCDC58-201ENST00000291458 CABIN1Q9Y6J0 2220 aa9.91□□□□□ -0.82
CCDC58-201ENST00000291458 PTPRBP23467 1997 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 LAMA1P25391 3075 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 TTC24A2A3L6 582 aaPredicted RBP9.9□□□□□ -0.82
CCDC58-201ENST00000291458 IGLON5A6NGN9 336 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 WASH4PA8MWX3 477 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 UPK3BL1B0FP48 263 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 C1QTNF9BB2RNN3 333 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 UPK3BL2E5RIL1 263 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 PRAMEF26H0Y7S4 382 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 RAD51BO15315 384 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 FFAR2O15552 330 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 PALMO75781 387 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 MAP3K6O95382 1288 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 POP4O95707 220 aaKnown RBP9.9□□□□□ -0.82
CCDC58-201ENST00000291458 CYP1A2P05177 515 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 TPM1P09493 284 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 ATXN1LP0C7T5 689 aaKnown RBP9.9□□□□□ -0.82
CCDC58-201ENST00000291458 C1QTNF9P0C862 333 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 ZNF883P0CG24 379 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 HNRNPA2B1P22626 353 aaKnown RBP9.9□□□□□ -0.82
CCDC58-201ENST00000291458 EPHA8P29322 1005 aaPredicted RBP9.9□□□□□ -0.82
CCDC58-201ENST00000291458 GRK6P43250 576 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 RGRP47804 291 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 ADKP55263 362 aaKnown RBP9.9□□□□□ -0.82
CCDC58-201ENST00000291458 CDH6P55285 790 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 CLDN6P56747 220 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 YBEYP58557 167 aaPredicted RBP9.9□□□□□ -0.82
CCDC58-201ENST00000291458 RAD51Q06609 339 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 CCDC15Q0P6D6 951 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 BNIP3Q12983 259 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 FGL2Q14314 439 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 SUZ12Q15022 739 aaKnown RBP9.9□□□□□ -0.82
CCDC58-201ENST00000291458 CYTH1Q15438 398 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 SHBQ15464 509 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 TCEA2Q15560 299 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 ST3GAL2Q16842 350 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 INAVAQ3KP66 663 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 ZNF805Q5CZA5 627 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 SPECC1LQ69YQ0 1117 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 GDPD4Q6W3E5 623 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 GCNT7Q6ZNI0 430 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 ARHGAP12Q8IWW6 846 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 UMODL1-AS1Q8N2C9 162 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.9□□□□□ -0.82
CCDC58-201ENST00000291458 EID2Q8N6I1 236 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 OR13H1Q8NG92 308 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 FNIP1Q8TF40 1166 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 SYN2Q92777 582 aaPredicted RBP9.9□□□□□ -0.82
CCDC58-201ENST00000291458 ISG20Q96AZ6 181 aaKnown RBP9.9□□□□□ -0.82
CCDC58-201ENST00000291458 IQCDQ96DY2 449 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 KLHDC7BQ96G42 594 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 LRRC19Q9H756 370 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 PDFQ9HBH1 243 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 SPTLC3Q9NUV7 552 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 DMTF1Q9Y222 760 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 COQ6Q9Y2Z9 468 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 DNAH14Q0VDD8 3507 aa9.9□□□□□ -0.82
CCDC58-201ENST00000291458 A6NNZ2 444 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 SPINT1O43278 529 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 AKR1B10O60218 316 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 PRAMEF11O60813 436 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 MMP20O60882 483 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 CBFA2T3O75081 653 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 MFAP3LO75121 409 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 CD48P09326 243 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 RARAP10276 462 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 TNNT1P13805 278 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 HTR7P34969 479 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 ARRB1P49407 418 aaPredicted RBP9.89□□□□□ -0.83
CCDC58-201ENST00000291458 NDST2P52849 883 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 SLC25A11Q02978 314 aaKnown RBP9.89□□□□□ -0.83
CCDC58-201ENST00000291458 DNAJC3Q13217 504 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 SGCGQ13326 291 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 DPYSQ14117 519 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 TRIM14Q14142 442 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 PIGHQ14442 188 aaPredicted RBP9.89□□□□□ -0.83
CCDC58-201ENST00000291458 ZNF235Q14590 738 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 KIAA1161Q6NSJ0 714 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 TMCO3Q6UWJ1 677 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 TTC7BQ86TV6 843 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 SLCO6A1Q86UG4 719 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 VSTM4Q8IW00 320 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 ATPAF2Q8N5M1 289 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 MFSD2AQ8NA29 543 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 TSEN2Q8NCE0 465 aaKnown RBP9.89□□□□□ -0.83
CCDC58-201ENST00000291458 CXorf40AQ8TE69 158 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 LRRN4Q8WUT4 740 aa9.89□□□□□ -0.83
CCDC58-201ENST00000291458 CTNNBL1Q8WYA6 563 aaPredicted RBP9.89□□□□□ -0.83
CCDC58-201ENST00000291458 CNDP2Q96KP4 475 aaKnown RBP9.89□□□□□ -0.83
CCDC58-201ENST00000291458 CSPG4P5Q96PW8 444 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms