RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 RRAGCQ9HB90 399 aa20.14■□□□□ 0.81
SCUBE1-201ENST00000290460 ENO4A6NNW6 628 aa20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 CFLARO15519 480 aa20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 PEX11BO96011 259 aa20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 KCNA5P22460 613 aa20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 SLC12A2P55011 1212 aa20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 PKNOX1P55347 436 aa20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 MSLNQ13421 630 aaPredicted RBP20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 IHHQ14623 411 aa20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 FOXB2Q5VYV0 432 aa20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 TRIM67Q6ZTA4 783 aa20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 PTCD2Q8WV60 388 aaKnown RBP20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 USP13Q92995 863 aaPredicted RBP20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 IFT43Q96FT9 208 aa20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 MRM3Q9HC36 420 aaKnown RBP20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 IGSF5Q9NSI5 407 aa20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 VTI1BQ9UEU0 232 aa20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 ASGR1P07306 291 aa20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 HAPLN1P10915 354 aaPredicted RBP20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 CD86P42081 329 aa20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 MLLT6P55198 1093 aaPredicted RBP20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 SLC10A7Q0GE19 358 aa20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 KDELC1Q6UW63 502 aa20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 LDB1Q86U70 411 aaPredicted RBP20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 ZNF280BQ86YH2 543 aa20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 CCDC117Q8IWD4 279 aaPredicted RBP20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 RP9Q8TA86 221 aaKnown RBP20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 GPR152Q8TDT2 470 aa20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 PABPC5Q96DU9 382 aaKnown RBP20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 HMCESQ96FZ2 354 aa20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 NR1H4Q96RI1 486 aaPredicted RBP20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 MRPL57Q9BQC6 102 aaKnown RBP20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 ARHGAP39Q9C0H5 1083 aa20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 KLHL4Q9C0H6 718 aa20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 PIDD1Q9HB75 910 aa20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 GTSE1Q9NYZ3 720 aa20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 COPG1Q9Y678 874 aaKnown RBP20.13■□□□□ 0.81
SCUBE1-201ENST00000290460 STX16-NPEPL1H3BU86 382 aa20.12■□□□□ 0.81
SCUBE1-201ENST00000290460 CNTN5O94779 1100 aa20.12■□□□□ 0.81
SCUBE1-201ENST00000290460 ENO3P13929 434 aaPredicted RBP20.12■□□□□ 0.81
SCUBE1-201ENST00000290460 GRK4P32298 578 aa20.12■□□□□ 0.81
SCUBE1-201ENST00000290460 DPP6P42658 865 aa20.12■□□□□ 0.81
SCUBE1-201ENST00000290460 PLK1P53350 603 aa20.12■□□□□ 0.81
SCUBE1-201ENST00000290460 ATXN3P54252 364 aaPredicted RBP20.12■□□□□ 0.81
SCUBE1-201ENST00000290460 ALFQ53S48 1182 aa20.12■□□□□ 0.81
SCUBE1-201ENST00000290460 CPSF7Q8N684 471 aaKnown RBP20.12■□□□□ 0.81
SCUBE1-201ENST00000290460 PPP2R3CQ969Q6 453 aa20.12■□□□□ 0.81
SCUBE1-201ENST00000290460 ZBTB26Q9HCK0 441 aa20.12■□□□□ 0.81
SCUBE1-201ENST00000290460 TNFRSF12AQ9NP84 129 aa20.12■□□□□ 0.81
SCUBE1-201ENST00000290460 NCKIPSDQ9NZQ3 722 aa20.12■□□□□ 0.81
SCUBE1-201ENST00000290460 STK39Q9UEW8 545 aa20.12■□□□□ 0.81
SCUBE1-201ENST00000290460 MTF2Q9Y483 593 aaPredicted RBP20.12■□□□□ 0.81
SCUBE1-201ENST00000290460 ASB3Q9Y575 518 aa20.12■□□□□ 0.81
SCUBE1-201ENST00000290460 XRCC1P18887 633 aaPredicted RBP20.11■□□□□ 0.81
SCUBE1-201ENST00000290460 HTR7P34969 479 aa20.11■□□□□ 0.81
SCUBE1-201ENST00000290460 HK2P52789 917 aa20.11■□□□□ 0.81
SCUBE1-201ENST00000290460 USP46P62068 366 aa20.11■□□□□ 0.81
SCUBE1-201ENST00000290460 C16orf89Q6UX73 402 aa20.11■□□□□ 0.81
SCUBE1-201ENST00000290460 IFNL1Q8IU54 200 aa20.11■□□□□ 0.81
SCUBE1-201ENST00000290460 SERPINB11Q96P15 392 aa20.11■□□□□ 0.81
SCUBE1-201ENST00000290460 TRMT13Q9NUP7 481 aaKnown RBP20.11■□□□□ 0.81
SCUBE1-201ENST00000290460 TBC1D13Q9NVG8 400 aa20.11■□□□□ 0.81
SCUBE1-201ENST00000290460 CLIC5Q9NZA1 410 aa20.11■□□□□ 0.81
SCUBE1-201ENST00000290460 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.11■□□□□ 0.81
SCUBE1-201ENST00000290460 TLL2Q9Y6L7 1015 aa20.11■□□□□ 0.81
SCUBE1-201ENST00000290460 POLD2P49005 469 aa20.11■□□□□ 0.81
SCUBE1-201ENST00000290460 POU4F1Q01851 419 aa20.11■□□□□ 0.81
SCUBE1-201ENST00000290460 DSC2Q02487 901 aa20.11■□□□□ 0.81
SCUBE1-201ENST00000290460 CRHR2Q13324 411 aa20.11■□□□□ 0.81
SCUBE1-201ENST00000290460 HNRNPDQ14103 355 aaKnown RBP20.11■□□□□ 0.81
SCUBE1-201ENST00000290460 BNC2Q6ZN30 1099 aaPredicted RBP20.11■□□□□ 0.81
SCUBE1-201ENST00000290460 PTAR1Q7Z6K3 402 aaPredicted RBP20.11■□□□□ 0.81
SCUBE1-201ENST00000290460 ZNF354CQ86Y25 554 aa20.11■□□□□ 0.81
SCUBE1-201ENST00000290460 SLC25A51Q9H1U9 297 aa20.11■□□□□ 0.81
SCUBE1-201ENST00000290460 GABRQQ9UN88 632 aa20.11■□□□□ 0.81
SCUBE1-201ENST00000290460 A0A087X1B8 175 aa20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 MANSC4A6NHS7 340 aaPredicted RBP20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 SLCO1B7G3V0H7 640 aa20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 SMIM24O75264 130 aa20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 TBX18O95935 607 aa20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 PAXIP1Q6ZW49 1069 aaPredicted RBP20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 SDCCAG8Q86SQ7 713 aaPredicted RBP20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 OR13J1Q8NGT2 312 aa20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 IMP4Q96G21 291 aaKnown RBP20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 NPAS2Q99743 824 aa20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 CCDC28BQ9BUN5 200 aa20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 PRKD2Q9BZL6 878 aa20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 SPC25Q9HBM1 224 aa20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 SDHDO14521 159 aa20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 NPHS1O60500 1241 aa20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 GJB3O75712 270 aa20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 TYMPP19971 482 aa20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 ATP5F1P24539 256 aaPredicted RBP20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 DNAJB1P25685 340 aa20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 SERPINH1P50454 418 aaKnown RBP20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 CEACAM7Q14002 265 aa20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 KCNA10Q16322 511 aa20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 PSMD5Q16401 504 aa20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 ZNF423Q2M1K9 1284 aa20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 GRAMD1BQ3KR37 738 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms