RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 IFT43Q96FT9 208 aa10.6□□□□□ -0.71
SNF8-201ENST00000290330 CELF6Q96J87 481 aaKnown RBP10.6□□□□□ -0.71
SNF8-201ENST00000290330 KCTD15Q96SI1 283 aaPredicted RBP10.6□□□□□ -0.71
SNF8-201ENST00000290330 CPEB1Q9BZB8 566 aaKnown RBP10.6□□□□□ -0.71
SNF8-201ENST00000290330 SLC39A8Q9C0K1 460 aa10.6□□□□□ -0.71
SNF8-201ENST00000290330 CCDC86Q9H6F5 360 aaKnown RBP10.6□□□□□ -0.71
SNF8-201ENST00000290330 MRPL47Q9HD33 250 aaKnown RBP10.6□□□□□ -0.71
SNF8-201ENST00000290330 UCKL1Q9NWZ5 548 aa10.6□□□□□ -0.71
SNF8-201ENST00000290330 DKK3Q9UBP4 350 aa10.6□□□□□ -0.71
SNF8-201ENST00000290330 UBA2Q9UBT2 640 aaPredicted RBP10.6□□□□□ -0.71
SNF8-201ENST00000290330 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.6□□□□□ -0.71
SNF8-201ENST00000290330 SCINQ9Y6U3 715 aa10.6□□□□□ -0.71
SNF8-201ENST00000290330 ASPMQ8IZT6 3477 aa10.6□□□□□ -0.71
SNF8-201ENST00000290330 PTPRBP23467 1997 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 SPTY2D1-AS1A0A0U1RR47 76 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 A0A1W2PQJ5 194 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 TRABD2BA6NFA1 517 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 FPGTO14772 594 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 PRPSAP2O60256 369 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 PRAMEF11O60813 436 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 MYBL1P10243 752 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 TIMP2P16035 220 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 ERCC2P18074 760 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 ITIH2P19823 946 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 PAPOLAP51003 745 aaKnown RBP10.59□□□□□ -0.71
SNF8-201ENST00000290330 CLDN6P56747 220 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 UBASH3AP57075 661 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 PFN3P60673 137 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 ILKQ13418 452 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 FZD2Q14332 565 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 ZNF542PQ5EBM4 170 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 PPP6R3Q5H9R7 873 aaPredicted RBP10.59□□□□□ -0.71
SNF8-201ENST00000290330 LRRC73Q5JTD7 316 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 AFMIDQ63HM1 303 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 KDM7AQ6ZMT4 941 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 RFX8Q6ZV50 586 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 PTAR1Q7Z6K3 402 aaPredicted RBP10.59□□□□□ -0.71
SNF8-201ENST00000290330 PSTKQ8IV42 348 aaKnown RBP10.59□□□□□ -0.71
SNF8-201ENST00000290330 SPC24Q8NBT2 197 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 OR4C6Q8NH72 309 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 HCAR2Q8TDS4 363 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 SYN2Q92777 582 aaPredicted RBP10.59□□□□□ -0.71
SNF8-201ENST00000290330 CENPTQ96BT3 561 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 EXOC2Q96KP1 924 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 DNAJC28Q9NX36 388 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 IFNKQ9P0W0 207 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 MYO1AQ9UBC5 1043 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 DKK4Q9UBT3 224 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 BZW2Q9Y6E2 419 aaKnown RBP10.59□□□□□ -0.71
SNF8-201ENST00000290330 IGF2RP11717 2491 aa10.59□□□□□ -0.71
SNF8-201ENST00000290330 TRPM6Q9BX84 2022 aa10.58□□□□□ -0.72
SNF8-201ENST00000290330 ARHGAP42A6NI28 874 aa10.58□□□□□ -0.72
SNF8-201ENST00000290330 FFAR2O15552 330 aa10.58□□□□□ -0.72
SNF8-201ENST00000290330 DAPK3O43293 454 aa10.58□□□□□ -0.72
SNF8-201ENST00000290330 MMP20O60882 483 aa10.58□□□□□ -0.72
SNF8-201ENST00000290330 TM7SF2O76062 418 aa10.58□□□□□ -0.72
SNF8-201ENST00000290330 PIGNO95427 931 aa10.58□□□□□ -0.72
SNF8-201ENST00000290330 CSF2P04141 144 aa10.58□□□□□ -0.72
SNF8-201ENST00000290330 JUPP14923 745 aa10.58□□□□□ -0.72
SNF8-201ENST00000290330 ACP1P24666 158 aa10.58□□□□□ -0.72
SNF8-201ENST00000290330 IL1R2P27930 398 aa10.58□□□□□ -0.72
SNF8-201ENST00000290330 PCK1P35558 622 aa10.58□□□□□ -0.72
SNF8-201ENST00000290330 RABIFP47224 123 aa10.58□□□□□ -0.72
SNF8-201ENST00000290330 HCAR3P49019 387 aa10.58□□□□□ -0.72
SNF8-201ENST00000290330 ZNF135P52742 658 aaPredicted RBP10.58□□□□□ -0.72
SNF8-201ENST00000290330 PDE1CQ14123 709 aaPredicted RBP10.58□□□□□ -0.72
SNF8-201ENST00000290330 GRM3Q14832 879 aa10.58□□□□□ -0.72
SNF8-201ENST00000290330 ACAP1Q15027 740 aa10.58□□□□□ -0.72
SNF8-201ENST00000290330 TDRD12Q587J7 1177 aaKnown RBP10.58□□□□□ -0.72
SNF8-201ENST00000290330 TPRG1LQ5T0D9 272 aa10.58□□□□□ -0.72
SNF8-201ENST00000290330 PARGQ86W56 976 aa10.58□□□□□ -0.72
SNF8-201ENST00000290330 ARHGAP12Q8IWW6 846 aa10.58□□□□□ -0.72
SNF8-201ENST00000290330 NPWQ8N729 165 aa10.58□□□□□ -0.72
SNF8-201ENST00000290330 PDCD7Q8N8D1 485 aaKnown RBP10.58□□□□□ -0.72
SNF8-201ENST00000290330 DENND6BQ8NEG7 585 aa10.58□□□□□ -0.72
SNF8-201ENST00000290330 ZNF641Q96N77 438 aaPredicted RBP10.58□□□□□ -0.72
SNF8-201ENST00000290330 NCAPGQ9BPX3 1015 aa10.58□□□□□ -0.72
SNF8-201ENST00000290330 XPO4Q9C0E2 1151 aaKnown RBP10.58□□□□□ -0.72
SNF8-201ENST00000290330 CWC15Q9P013 229 aaKnown RBP10.58□□□□□ -0.72
SNF8-201ENST00000290330 CAPN11Q9UMQ6 739 aa10.58□□□□□ -0.72
SNF8-201ENST00000290330 ARID1BQ8NFD5 2236 aaPredicted RBP10.58□□□□□ -0.72
SNF8-201ENST00000290330 ZFHX4Q86UP3 3567 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 TSPAN11A1L157 253 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 NEMP2A6NFY4 417 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 SCAMP1O15126 338 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 BUB1BO60566 1050 aaPredicted RBP10.57□□□□□ -0.72
SNF8-201ENST00000290330 PALMO75781 387 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 SERPING1P05155 500 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 NME1P15531 152 aaKnown RBP10.57□□□□□ -0.72
SNF8-201ENST00000290330 TCF4P15884 667 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 HNF1BP35680 557 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 IGFALSP35858 605 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 RGRP47804 291 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 CSNK1DP48730 415 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 SUOXP51687 545 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 HNRNPKP61978 463 aaKnown RBP eCLIP10.57□□□□□ -0.72
SNF8-201ENST00000290330 ZBED6P86452 979 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 CYP4F3Q08477 520 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 DPYSQ14117 519 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 DPYSL2Q16555 572 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms