RNA–Protein interactions for RNA: ENST00000286301.7

CSF1R-201, Transcript of colony stimulating factor 1 receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF1R, Length 3,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-201ENST00000286301 MID2Q9UJV3 735 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 MAGEB16A2A368 324 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 ERI2A8K979 691 aaKnown RBP9.44□□□□□ -0.9
CSF1R-201ENST00000286301 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.44□□□□□ -0.9
CSF1R-201ENST00000286301 AP3B1O00203 1094 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 NDUFS3O75489 264 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 WFS1O76024 890 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 SUPT7LO94864 414 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 HAPLN1P10915 354 aaPredicted RBP9.44□□□□□ -0.9
CSF1R-201ENST00000286301 MLNP12872 115 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 TSHRP16473 764 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 SOX11P35716 441 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 MLLT6P55198 1093 aaPredicted RBP9.44□□□□□ -0.9
CSF1R-201ENST00000286301 MYBPC3Q14896 1274 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 PRKD1Q15139 912 aaPredicted RBP9.44□□□□□ -0.9
CSF1R-201ENST00000286301 FBXO48Q5FWF7 155 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 TAS1R1Q7RTX1 841 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 TMEM173Q86WV6 379 aaPredicted RBP9.44□□□□□ -0.9
CSF1R-201ENST00000286301 LRRC43Q8N309 656 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 AFAP1L2Q8N4X5 818 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 KLHDC9Q8NEP7 349 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 NMUR2Q9GZQ4 415 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 PACSIN3Q9UKS6 424 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 BLOC1S6Q9UL45 172 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 WASF2Q9Y6W5 498 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 LCTP09848 1927 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 MTMR11A4FU01 709 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 MATN3O15232 486 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 LRG1P02750 347 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 GALTP07902 379 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 GJA1P17302 382 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 GM2AP17900 193 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 HDCP19113 662 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 SKIV2L2P42285 1042 aaKnown RBP9.44□□□□□ -0.9
CSF1R-201ENST00000286301 IRF5Q13568 498 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 UBAP2LQ14157 1087 aaKnown RBP9.44□□□□□ -0.9
CSF1R-201ENST00000286301 PTPRCAPQ14761 206 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 C1QTNF12Q5T7M4 302 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.44□□□□□ -0.9
CSF1R-201ENST00000286301 COLGALT2Q8IYK4 626 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 NUF2Q9BZD4 464 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 GPR63Q9BZJ6 419 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 OLA1Q9NTK5 396 aaKnown RBP9.44□□□□□ -0.9
CSF1R-201ENST00000286301 THAP1Q9NVV9 213 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 FBXO5Q9UKT4 447 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 LRRC42Q9Y546 428 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 PARP14Q460N5 1801 aa9.44□□□□□ -0.9
CSF1R-201ENST00000286301 I6L893 689 aaPredicted RBP9.43□□□□□ -0.9
CSF1R-201ENST00000286301 SYN3O14994 580 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 ZSCAN9O15535 394 aaPredicted RBP9.43□□□□□ -0.9
CSF1R-201ENST00000286301 NBNO60934 754 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 USP1O94782 785 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 BPGMP07738 259 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 CHRM3P20309 590 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 KPNA2P52292 529 aaKnown RBP9.43□□□□□ -0.9
CSF1R-201ENST00000286301 CAP1Q01518 475 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 MGAT3Q09327 533 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 TSTA3Q13630 321 aaPredicted RBP9.43□□□□□ -0.9
CSF1R-201ENST00000286301 TRIM60Q495X7 471 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 FAM171BQ6P995 826 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 EFCAB3Q8N7B9 438 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 CNTD1Q8N815 330 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 MARK4Q96L34 752 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 POLR1EQ9GZS1 481 aaKnown RBP9.43□□□□□ -0.9
CSF1R-201ENST00000286301 SMOC2Q9H3U7 446 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 AFF4Q9UHB7 1163 aaKnown RBP9.43□□□□□ -0.9
CSF1R-201ENST00000286301 PAIP2BQ9ULR5 123 aaKnown RBP9.43□□□□□ -0.9
CSF1R-201ENST00000286301 STX7O15400 261 aaKnown RBP9.43□□□□□ -0.9
CSF1R-201ENST00000286301 DCXO43602 365 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 ITGB6P18564 788 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 TCN1P20061 433 aaPredicted RBP9.43□□□□□ -0.9
CSF1R-201ENST00000286301 CCNCP24863 283 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 CORO1AP31146 461 aaKnown RBP9.43□□□□□ -0.9
CSF1R-201ENST00000286301 GALK1P51570 392 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 OCRLQ01968 901 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 GALNT2Q10471 571 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 OTUD1Q5VV17 481 aaPredicted RBP9.43□□□□□ -0.9
CSF1R-201ENST00000286301 ZSCAN18Q8TBC5 510 aaPredicted RBP9.43□□□□□ -0.9
CSF1R-201ENST00000286301 ASIC4Q96FT7 647 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 ZNF558Q96NG5 402 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 MLPHQ9BV36 600 aaPredicted RBP9.43□□□□□ -0.9
CSF1R-201ENST00000286301 ILKAPQ9H0C8 392 aaPredicted RBP9.43□□□□□ -0.9
CSF1R-201ENST00000286301 SCUBE2Q9NQ36 999 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 OSER1Q9NX31 292 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 UBA2Q9UBT2 640 aaPredicted RBP9.43□□□□□ -0.9
CSF1R-201ENST00000286301 PCDHGC4Q9Y5F7 938 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 ACTL7AQ9Y615 435 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 HEATR9A2RTY3 570 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 FAM159BA6NKW6 160 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 M0QZQ0 153 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 HNRNPCL1O60812 293 aaKnown RBP9.43□□□□□ -0.9
CSF1R-201ENST00000286301 TRIM13O60858 407 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 RFPL1O75677 317 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 RHOBTB1O94844 696 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 GJB5O95377 273 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 STAMBPO95630 424 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 SERPINE1P05121 402 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 CD68P34810 354 aaPredicted RBP9.43□□□□□ -0.9
CSF1R-201ENST00000286301 EPHB3P54753 998 aa9.43□□□□□ -0.9
CSF1R-201ENST00000286301 NME5P56597 212 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms