RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 ATP9AO75110 1047 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 FAAP100Q0VG06 881 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 PPP2R2DQ66LE6 453 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 UGT2B28Q9BY64 529 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 VPS4AQ9UN37 437 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 GNB5O14775 395 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 DCXO43602 365 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 C4orf19Q8IY42 314 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 KAT5Q92993 513 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 BDH2Q9BUT1 245 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 MAGEB16A2A368 324 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 VIL1P09327 827 aaKnown RBP20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 MIPP30301 263 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 LRRC73Q5JTD7 316 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 RORBQ92753 470 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 AARSD1Q9BTE6 412 aaKnown RBP20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 ERVK-11Q9UQG0 969 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 PCDHA3Q9Y5H8 950 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 STBD1O95210 358 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 BRCC3P46736 316 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 PRKG2Q13237 762 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 CARTPTQ16568 116 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 CCDC153Q494R4 210 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 STXBP5Q5T5C0 1151 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 LENG9Q96B70 501 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 CDRT15Q96T59 188 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 ALDH8A1Q9H2A2 487 aaPredicted RBP20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 ST3GAL5Q9UNP4 418 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 HECW2Q9P2P5 1572 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 SEMA5AQ13591 1074 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 FAM46CQ5VWP2 391 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 LRRC49Q8IUZ0 686 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 LDLRP01130 860 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 VIPP01282 170 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 TNFSF9P41273 254 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 DHPSP49366 369 aaPredicted RBP20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 ZBTB46Q86UZ6 589 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 ZNF518BQ9C0D4 1074 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 DNPEPQ9ULA0 475 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 PHF24Q9UPV7 400 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 UMODL1Q5DID0 1318 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 PIAS1O75925 651 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 CTDNEP1O95476 244 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 BCL10O95999 233 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 IL12RB1P42701 662 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 OR6Y1Q8NGX8 325 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 NKD1Q969G9 470 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 MPP4Q96JB8 637 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 FCRL4Q96PJ5 515 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 EPHB6O15197 1021 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 PCDH1Q08174 1060 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 DUSP4Q13115 394 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 USP50Q70EL3 339 aaPredicted RBP20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 NRDE2Q9H7Z3 1164 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 CNOT6Q9ULM6 557 aaKnown RBP20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 SLC26A4O43511 780 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 LYNP07948 512 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 CPSF6Q16630 551 aaKnown RBP eCLIP20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 CCNYL2Q5T2Q4 361 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 KBTBD2Q8IY47 623 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 PTGR2Q8N8N7 351 aaPredicted RBP20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 FRMD8Q9BZ67 464 aaPredicted RBP20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 CAPN6Q9Y6Q1 641 aa20.47■□□□□ 0.87
CACNA1B-201ENST00000277549 OR1D2P34982 312 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 SLC9A6Q92581 669 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 CEP44Q9C0F1 390 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 EPS8L2Q9H6S3 715 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 CNTNAP4Q9C0A0 1308 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 CLOCKO15516 846 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 ASNA1O43681 348 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 CNTFP26441 200 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 PLGLB1Q02325 96 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 TMPRSS9Q7Z410 1059 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 ATCAYQ86WG3 371 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 CLVS1Q8IUQ0 354 aaPredicted RBP20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 TSEN15Q8WW01 171 aaKnown RBP20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 GAL3ST3Q96A11 431 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 PIGUQ9H490 435 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 CPED1A4D0V7 1026 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 FTH1P02794 183 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 EIF2B2P49770 351 aaKnown RBP20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 SVOPQ8N4V2 548 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 NAALADL1Q9UQQ1 740 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 IRF6O14896 467 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 MSI1O43347 362 aaKnown RBP20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 LSM8O95777 96 aaKnown RBP20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 FNBP1LQ5T0N5 605 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 DNASE1L2Q92874 299 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 DSN1Q9H410 356 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 NPEPPSL1A6NEC2 478 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 ZNF410Q86VK4 478 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 ZFP28Q8NHY6 868 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 KLHL5Q96PQ7 755 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 SPATA9Q9BWV2 254 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 IKZF2Q9UKS7 526 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 PCDHAC2Q9Y5I4 1007 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 CLPTM1O96005 669 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 CALB2P22676 271 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 DLG4P78352 724 aa20.46■□□□□ 0.87
CACNA1B-201ENST00000277549 SLC20A2Q08357 652 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms