RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 FBXO5Q9UKT4 447 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 ASB3Q9Y575 518 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 NUMBLQ9Y6R0 609 aa16.78■□□□□ 0.28
CCDC40-201ENST00000269318 A0A0G2JND7 137 aa16.77■□□□□ 0.28
CCDC40-201ENST00000269318 LDB2O43679 373 aa16.77■□□□□ 0.28
CCDC40-201ENST00000269318 FGF1P05230 155 aa16.77■□□□□ 0.28
CCDC40-201ENST00000269318 RGRP47804 291 aa16.77■□□□□ 0.28
CCDC40-201ENST00000269318 KIAA0408Q6ZU52 694 aa16.77■□□□□ 0.28
CCDC40-201ENST00000269318 C10orf107Q8IVU9 208 aa16.77■□□□□ 0.28
CCDC40-201ENST00000269318 FIBCD1Q8N539 461 aa16.77■□□□□ 0.28
CCDC40-201ENST00000269318 OR6Y1Q8NGX8 325 aa16.77■□□□□ 0.28
CCDC40-201ENST00000269318 ECT2Q9H8V3 914 aa16.77■□□□□ 0.28
CCDC40-201ENST00000269318 THAP1Q9NVV9 213 aa16.77■□□□□ 0.28
CCDC40-201ENST00000269318 SSX2IPQ9Y2D8 614 aa16.77■□□□□ 0.28
CCDC40-201ENST00000269318 ANKRD6Q9Y2G4 727 aa16.77■□□□□ 0.28
CCDC40-201ENST00000269318 SERPINF2P08697 491 aa16.77■□□□□ 0.27
CCDC40-201ENST00000269318 SLC35E2BP0CK96 405 aa16.77■□□□□ 0.27
CCDC40-201ENST00000269318 HSPA8P11142 646 aaKnown RBP16.77■□□□□ 0.27
CCDC40-201ENST00000269318 ARFIP2P53365 341 aa16.77■□□□□ 0.27
CCDC40-201ENST00000269318 USP10Q14694 798 aaKnown RBP16.77■□□□□ 0.27
CCDC40-201ENST00000269318 SPDYAQ5MJ70 313 aa16.77■□□□□ 0.27
CCDC40-201ENST00000269318 RNF219Q5W0B1 726 aaPredicted RBP16.77■□□□□ 0.27
CCDC40-201ENST00000269318 ZNF783Q6ZMS7 281 aa16.77■□□□□ 0.27
CCDC40-201ENST00000269318 GAREM2Q75VX8 874 aa16.77■□□□□ 0.27
CCDC40-201ENST00000269318 TMC8Q8IU68 726 aa16.77■□□□□ 0.27
CCDC40-201ENST00000269318 FAM217AQ8IXS0 508 aa16.77■□□□□ 0.27
CCDC40-201ENST00000269318 KLHL23Q8NBE8 558 aa16.77■□□□□ 0.27
CCDC40-201ENST00000269318 IFT43Q96FT9 208 aa16.77■□□□□ 0.27
CCDC40-201ENST00000269318 CINPQ9BW66 212 aaPredicted RBP16.77■□□□□ 0.27
CCDC40-201ENST00000269318 TMEM120AQ9BXJ8 343 aa16.77■□□□□ 0.27
CCDC40-201ENST00000269318 NOD2Q9HC29 1040 aa16.77■□□□□ 0.27
CCDC40-201ENST00000269318 CPQQ9Y646 472 aa16.77■□□□□ 0.27
CCDC40-201ENST00000269318 FAM95CA0A1B0GW59 222 aa16.76■□□□□ 0.27
CCDC40-201ENST00000269318 ZBBXA8MT70 800 aa16.76■□□□□ 0.27
CCDC40-201ENST00000269318 G3V2L1 256 aa16.76■□□□□ 0.27
CCDC40-201ENST00000269318 H0YHG0 523 aa16.76■□□□□ 0.27
CCDC40-201ENST00000269318 SLC7A4O43246 635 aa16.76■□□□□ 0.27
CCDC40-201ENST00000269318 CD160O95971 181 aa16.76■□□□□ 0.27
CCDC40-201ENST00000269318 HDCP19113 662 aa16.76■□□□□ 0.27
CCDC40-201ENST00000269318 SKIV2L2P42285 1042 aaKnown RBP16.76■□□□□ 0.27
CCDC40-201ENST00000269318 CD151P48509 253 aa16.76■□□□□ 0.27
CCDC40-201ENST00000269318 ARSDP51689 593 aa16.76■□□□□ 0.27
CCDC40-201ENST00000269318 ARF5P84085 180 aa16.76■□□□□ 0.27
CCDC40-201ENST00000269318 ACVR1Q04771 509 aa16.76■□□□□ 0.27
CCDC40-201ENST00000269318 CYTH1Q15438 398 aa16.76■□□□□ 0.27
CCDC40-201ENST00000269318 HSF5Q4G112 596 aaPredicted RBP16.76■□□□□ 0.27
CCDC40-201ENST00000269318 SLC41A1Q8IVJ1 513 aa16.76■□□□□ 0.27
CCDC40-201ENST00000269318 TNS4Q8IZW8 715 aa16.76■□□□□ 0.27
CCDC40-201ENST00000269318 KIAA0100Q14667 2235 aaKnown RBP16.76■□□□□ 0.27
CCDC40-201ENST00000269318 CBX4O00257 560 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 SCAMP3O14828 347 aaKnown RBP16.75■□□□□ 0.27
CCDC40-201ENST00000269318 AURKAO14965 403 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 PHGDHO43175 533 aaKnown RBP16.75■□□□□ 0.27
CCDC40-201ENST00000269318 HAUS5O94927 633 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 C1RP00736 705 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 SERPINE1P05121 402 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 CPA3P15088 417 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 DNAJB1P25685 340 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 GABRR2P28476 465 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 PGGT1BP53609 377 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 GALNT3Q14435 633 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 FSCBQ5H9T9 825 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 GALNT7Q86SF2 657 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 MTDHQ86UE4 582 aaKnown RBP16.75■□□□□ 0.27
CCDC40-201ENST00000269318 LCA5Q86VQ0 697 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 CRLF3Q8IUI8 442 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 ARID3BQ8IVW6 561 aaPredicted RBP16.75■□□□□ 0.27
CCDC40-201ENST00000269318 CEP97Q8IW35 865 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 HS6ST3Q8IZP7 471 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 TMEM151AQ8N4L1 468 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 CALML6Q8TD86 181 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 PEX13Q92968 403 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 MFSD1Q9H3U5 465 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 NMRAL1Q9HBL8 299 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 KCNK4Q9NYG8 393 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 KCTD3Q9Y597 815 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 INSIG1O15503 277 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 ITM2AO43736 263 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 TBL1XO60907 577 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 ZMPSTE24O75844 475 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 RASSF9O75901 435 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 UNC5CO95185 931 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 CXCL14O95715 111 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 NDST3O95803 873 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 FGBP02675 491 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 MYL2P10916 166 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 CA8P35219 290 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 LEPRP48357 1165 aaKnown RBP16.75■□□□□ 0.27
CCDC40-201ENST00000269318 RAB10P61026 200 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 CYP4F8P98187 520 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 ATG14Q6ZNE5 492 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 RAPH1Q70E73 1250 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 ASRGL1Q7L266 308 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 CENPLQ8N0S6 344 aaPredicted RBP16.75■□□□□ 0.27
CCDC40-201ENST00000269318 HJURPQ8NCD3 748 aaPredicted RBP16.75■□□□□ 0.27
CCDC40-201ENST00000269318 PPP1R14CQ8TAE6 165 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 SKA1Q96BD8 255 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 MUC3BQ9H195 1237 aa16.75■□□□□ 0.27
CCDC40-201ENST00000269318 CXXC1Q9P0U4 656 aaPredicted RBP16.75■□□□□ 0.27
CCDC40-201ENST00000269318 HEY2Q9UBP5 337 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms