RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 PSME2Q9UL46 239 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 TSPAN3O60637 253 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 ZBTB7AO95365 584 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 PGM5Q15124 567 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 SAMD3Q8N6K7 520 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 DCBLD1Q8N8Z6 715 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 SNX27Q96L92 541 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 BDH2Q9BUT1 245 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 TRPV5Q9NQA5 729 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.42■□□□□ 0.22
GPC1-201ENST00000264039 MTRRQ9UBK8 725 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 CYTH4Q9UIA0 394 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 ANAPC2Q9UJX6 822 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 PMF1-BGLAPU3KQ54 211 aa16.42■□□□□ 0.22
GPC1-201ENST00000264039 MPOP05164 745 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 CHRNB3Q05901 458 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 DGUOKQ16854 277 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 ZNF470Q6ECI4 717 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 ANKRD26P1Q6NSI1 321 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 DSG4Q86SJ6 1040 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 NSMCE2Q96MF7 247 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 TWNKQ96RR1 684 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 NT5C1AQ9BXI3 368 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 HACD3Q9P035 362 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 ERGIC3Q9Y282 383 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 C10orf71Q711Q0 1435 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 NUP188Q5SRE5 1749 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 OGTO15294 1046 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 SNAP91O60641 907 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 PHC1P78364 1004 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 ARHGAP17Q68EM7 881 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 BORAQ6PGQ7 559 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 ELMSAN1Q6PJG2 1045 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 LYSMD3Q7Z3D4 306 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 CNTD1Q8N815 330 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 SLC45A3Q96JT2 553 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 CDCA7Q9BWT1 371 aaPredicted RBP16.41■□□□□ 0.22
GPC1-201ENST00000264039 VTA1Q9NP79 307 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 A0A0J9YYE9 177 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 EEF2KO00418 725 aaKnown RBP16.41■□□□□ 0.22
GPC1-201ENST00000264039 APOA4P06727 396 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 HOXD11P31277 338 aaPredicted RBP16.41■□□□□ 0.22
GPC1-201ENST00000264039 FAM219BQ5XKK7 198 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 DACT3Q96B18 629 aaPredicted RBP16.41■□□□□ 0.22
GPC1-201ENST00000264039 PRRG3Q9BZD7 231 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 ASPSCR1Q9BZE9 553 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 CDHR5Q9HBB8 845 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 SATB2Q9UPW6 733 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 SNX8Q9Y5X2 465 aa16.41■□□□□ 0.22
GPC1-201ENST00000264039 PRSS51A0A1B0GVH4 220 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 H3BMM5 538 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 FAM189A1O60320 539 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 HARS2P49590 506 aaKnown RBP16.4■□□□□ 0.22
GPC1-201ENST00000264039 ACADVLP49748 655 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 FRG1Q14331 258 aaKnown RBP16.4■□□□□ 0.22
GPC1-201ENST00000264039 PRR23CQ6ZRP0 262 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 BTLAQ7Z6A9 289 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 ZDHHC13Q8IUH4 622 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 DENND6AQ8IWF6 608 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 VPS33AQ96AX1 596 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 NPLQ9BXD5 320 aaPredicted RBP16.4■□□□□ 0.22
GPC1-201ENST00000264039 TBC1D14Q9P2M4 693 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 UBA6A0AVT1 1052 aaPredicted RBP16.4■□□□□ 0.22
GPC1-201ENST00000264039 C3orf70A6NLC5 250 aaPredicted RBP16.4■□□□□ 0.22
GPC1-201ENST00000264039 ERI2A8K979 691 aaKnown RBP16.4■□□□□ 0.22
GPC1-201ENST00000264039 VWA5AO00534 786 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 MPP1Q00013 466 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 ECT2LQ008S8 904 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 TRIM32Q13049 653 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 SH3BP5LQ7L8J4 393 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 WDR49Q8IV35 697 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 TMEM102Q8N9M5 508 aaPredicted RBP16.4■□□□□ 0.22
GPC1-201ENST00000264039 TRAPPC12Q8WVT3 735 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 KIF12Q96FN5 646 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 FEM1AQ9BSK4 669 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 SARS2Q9NP81 518 aaKnown RBP16.4■□□□□ 0.22
GPC1-201ENST00000264039 MID1IP1Q9NPA3 183 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.4■□□□□ 0.22
GPC1-201ENST00000264039 NUDT5Q9UKK9 219 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 CARD8Q9Y2G2 431 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 A0A087WZ62 844 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 TMEM114B3SHH9 223 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 AQP9O43315 295 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 CLASP2O75122 1294 aaKnown RBP16.4■□□□□ 0.22
GPC1-201ENST00000264039 CAPGP40121 348 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 TPI1P60174 286 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 TMTC4Q5T4D3 741 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 BRSK2Q8IWQ3 736 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 ABHD11Q8NFV4 315 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 SUN5Q8TC36 379 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 NSUN6Q8TEA1 469 aaKnown RBP16.4■□□□□ 0.22
GPC1-201ENST00000264039 STRA6Q9BX79 667 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 ALG9Q9H6U8 611 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 TMPRSS4Q9NRS4 437 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 CACNA2D2Q9NY47 1150 aa16.4■□□□□ 0.22
GPC1-201ENST00000264039 FAM95CA0A1B0GW59 222 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 M0QYT0 321 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 CABYRO75952 493 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 BMP10O95393 424 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 MATN1P21941 496 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms