RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 VPS51Q9UID3 782 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 PAIP2BQ9ULR5 123 aaKnown RBP14.1□□□□□ -0.15
CDH3-201ENST00000264012 ZNF711Q9Y462 761 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 DUOX1Q9NRD9 1551 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 LRRC37A3O60309 1634 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.1□□□□□ -0.15
CDH3-201ENST00000264012 CLDN11O75508 207 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 ASPAP45381 313 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 MRPS22P82650 360 aaKnown RBP14.1□□□□□ -0.15
CDH3-201ENST00000264012 CYP2A13Q16696 494 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 PIK3R5Q8WYR1 880 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 MTFMTQ96DP5 389 aaKnown RBP14.1□□□□□ -0.15
CDH3-201ENST00000264012 FAXDC2Q96IV6 333 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 RAD18Q9NS91 495 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 ZNF536O15090 1300 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 MYBPHLA2RUH7 354 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 ZMPSTE24O75844 475 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 LMO2P25791 158 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 ZNF621Q6ZSS3 439 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 PYDC1Q8WXC3 89 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 PHF21AQ96BD5 680 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 LYPLA1O75608 230 aaPredicted RBP14.09□□□□□ -0.15
CDH3-201ENST00000264012 GSTM1P09488 218 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 FAM58BPP0C7Q3 252 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 COX4I1P13073 169 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 NEK2P51955 445 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 SP2Q02086 613 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 FASTKD3Q14CZ7 662 aaKnown RBP14.09□□□□□ -0.15
CDH3-201ENST00000264012 TRIM60Q495X7 471 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 FNBP1LQ5T0N5 605 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 ADAMTSL2Q86TH1 951 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 CSGALNACT1Q8TDX6 532 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 ZNF516Q92618 1163 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 STK39Q9UEW8 545 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 PSMG1O95456 288 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 PIGRP01833 764 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 C2P06681 752 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 HNRNPLP14866 589 aaKnown RBP eCLIP14.09□□□□□ -0.15
CDH3-201ENST00000264012 RNASEH2BQ5TBB1 312 aaKnown RBP14.09□□□□□ -0.15
CDH3-201ENST00000264012 SERPINA13PQ6UXR4 307 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 STK32CQ86UX6 486 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 PYROXD2Q8N2H3 581 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 RABGEF1Q9UJ41 708 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 TMCO1Q9UM00 188 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 LZTS1Q9Y250 596 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 SNTNA6NMZ2 147 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 LRIG2O94898 1065 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 CXCL14O95715 111 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 EPHA3P29320 983 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 ATP6V0D1P61421 351 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 KCNJ2P63252 427 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 UBE3AQ05086 875 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 ANKRD22Q5VYY1 191 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 C10orf53Q8N6V4 93 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 CD99L2Q8TCZ2 262 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 TBCDQ9BTW9 1192 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 UGT2B28Q9BY64 529 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 SDCBP2Q9H190 292 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 RNPEPL1Q9HAU8 725 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 KRT84Q9NSB2 600 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 CHKBQ9Y259 395 aa14.09□□□□□ -0.15
CDH3-201ENST00000264012 SPATA31D3P0C874 917 aa14.08□□□□□ -0.15
CDH3-201ENST00000264012 SP100P23497 879 aaPredicted RBP14.08□□□□□ -0.15
CDH3-201ENST00000264012 NDUFV1P49821 464 aa14.08□□□□□ -0.15
CDH3-201ENST00000264012 SQLEQ14534 574 aa14.08□□□□□ -0.15
CDH3-201ENST00000264012 PAGE2BQ5JRK9 111 aa14.08□□□□□ -0.15
CDH3-201ENST00000264012 SPATA31D4Q6ZUB0 917 aa14.08□□□□□ -0.15
CDH3-201ENST00000264012 MARK2Q7KZI7 788 aaKnown RBP14.08□□□□□ -0.15
CDH3-201ENST00000264012 CDYL2Q8N8U2 506 aa14.08□□□□□ -0.15
CDH3-201ENST00000264012 MAGEC3Q8TD91 643 aa14.08□□□□□ -0.15
CDH3-201ENST00000264012 C1QTNF7Q9BXJ2 289 aa14.08□□□□□ -0.15
CDH3-201ENST00000264012 NCKAP1Q9Y2A7 1128 aa14.08□□□□□ -0.15
CDH3-201ENST00000264012 KRT87PA6NCN2 255 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 E9PAM4 449 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 BPGMP07738 259 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 SNRPB2P08579 225 aaKnown RBP14.08□□□□□ -0.16
CDH3-201ENST00000264012 RHOQP17081 205 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 PCYT1AP49585 367 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 ARHGAP1Q07960 439 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 PARP15Q460N3 678 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 OLFML2BQ68BL8 750 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 EID3Q8N140 333 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 BRI3BPQ8WY22 251 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 INVSQ9Y283 1065 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 FFAR3O14843 346 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 CLOCKO15516 846 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 GPR42O15529 346 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 SNUPNO95149 360 aaKnown RBP14.08□□□□□ -0.16
CDH3-201ENST00000264012 MC4RP32245 332 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 CACNA2D1P54289 1103 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 IL5RAQ01344 420 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 EIF2B5Q13144 721 aaKnown RBP14.08□□□□□ -0.16
CDH3-201ENST00000264012 UBAP2LQ14157 1087 aaKnown RBP14.08□□□□□ -0.16
CDH3-201ENST00000264012 PHKG1Q16816 387 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 INSCQ1MX18 579 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 NAIF1Q69YI7 327 aaPredicted RBP14.08□□□□□ -0.16
CDH3-201ENST00000264012 TMEM26Q6ZUK4 368 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 TMEM192Q8IY95 271 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 MAB21L3Q8N8X9 362 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 ITFG1Q8TB96 612 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms