RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 LZTR1Q8N653 840 aa16.27■□□□□ 0.2
USE1-201ENST00000263897 IFT43Q96FT9 208 aa16.27■□□□□ 0.2
USE1-201ENST00000263897 EXOC2Q96KP1 924 aa16.27■□□□□ 0.2
USE1-201ENST00000263897 ZWILCHQ9H900 591 aa16.27■□□□□ 0.2
USE1-201ENST00000263897 IP6K2Q9UHH9 426 aa16.27■□□□□ 0.2
USE1-201ENST00000263897 FPGTO14772 594 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 BUB1BO60566 1050 aaPredicted RBP16.26■□□□□ 0.19
USE1-201ENST00000263897 SDC3O75056 442 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 PALMO75781 387 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 C1SP09871 688 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 RARAP10276 462 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 ITIH2P19823 946 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 DGKAP23743 735 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 CSNK1DP48730 415 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 SUOXP51687 545 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 IL10RBQ08334 325 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 CCDC157Q569K6 752 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 POLNQ7Z5Q5 900 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 SRLQ86TD4 932 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 SLC22A18ASQ8N1D0 253 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 GALNT15Q8N3T1 639 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 NPWQ8N729 165 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 NIPA2Q8N8Q9 360 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 TSC1Q92574 1164 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 CENPTQ96BT3 561 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 BTBD6Q96KE9 485 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 ZNF641Q96N77 438 aaPredicted RBP16.26■□□□□ 0.19
USE1-201ENST00000263897 NUP85Q9BW27 656 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 SUV39H2Q9H5I1 410 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 GPR27Q9NS67 375 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 ANAPC7Q9UJX3 599 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 ZMIZ1Q9ULJ6 1067 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 PCDHGA1Q9Y5H4 931 aa16.26■□□□□ 0.19
USE1-201ENST00000263897 H3BRJ5 948 aa16.25■□□□□ 0.19
USE1-201ENST00000263897 DFFAO00273 331 aa16.25■□□□□ 0.19
USE1-201ENST00000263897 MMP20O60882 483 aa16.25■□□□□ 0.19
USE1-201ENST00000263897 PIGNO95427 931 aa16.25■□□□□ 0.19
USE1-201ENST00000263897 CAPNS1P04632 268 aa16.25■□□□□ 0.19
USE1-201ENST00000263897 AMPD1P23109 780 aa16.25■□□□□ 0.19
USE1-201ENST00000263897 EIF4A3P38919 411 aaKnown RBP16.25■□□□□ 0.19
USE1-201ENST00000263897 ARL4AP40617 200 aa16.25■□□□□ 0.19
USE1-201ENST00000263897 NSUN2Q08J23 767 aaKnown RBP eCLIP16.25■□□□□ 0.19
USE1-201ENST00000263897 DNAJC3Q13217 504 aa16.25■□□□□ 0.19
USE1-201ENST00000263897 FZD2Q14332 565 aa16.25■□□□□ 0.19
USE1-201ENST00000263897 SMAD1Q15797 465 aaKnown RBP16.25■□□□□ 0.19
USE1-201ENST00000263897 SMTNL2Q2TAL5 461 aa16.25■□□□□ 0.19
USE1-201ENST00000263897 TMEM52BQ4KMG9 183 aa16.25■□□□□ 0.19
USE1-201ENST00000263897 LRRC73Q5JTD7 316 aa16.25■□□□□ 0.19
USE1-201ENST00000263897 TXNRD3NBQ6F5E7 133 aa16.25■□□□□ 0.19
USE1-201ENST00000263897 KYAT3Q6YP21 454 aaKnown RBP16.25■□□□□ 0.19
USE1-201ENST00000263897 ARHGAP36Q6ZRI8 547 aa16.25■□□□□ 0.19
USE1-201ENST00000263897 PTAR1Q7Z6K3 402 aaPredicted RBP16.25■□□□□ 0.19
USE1-201ENST00000263897 TP53INP2Q8IXH6 220 aa16.25■□□□□ 0.19
USE1-201ENST00000263897 TSEN2Q8NCE0 465 aaKnown RBP16.25■□□□□ 0.19
USE1-201ENST00000263897 DENND6BQ8NEG7 585 aa16.25■□□□□ 0.19
USE1-201ENST00000263897 TEKT4Q8WW24 435 aa16.25■□□□□ 0.19
USE1-201ENST00000263897 HSPH1Q92598 858 aa16.25■□□□□ 0.19
USE1-201ENST00000263897 TUBGCP5Q96RT8 1024 aa16.25■□□□□ 0.19
USE1-201ENST00000263897 IPO11Q9UI26 975 aaKnown RBP16.25■□□□□ 0.19
USE1-201ENST00000263897 NENFQ9UMX5 172 aa16.25■□□□□ 0.19
USE1-201ENST00000263897 SPTY2D1-AS1A0A0U1RR47 76 aa16.24■□□□□ 0.19
USE1-201ENST00000263897 TSPAN11A1L157 253 aa16.24■□□□□ 0.19
USE1-201ENST00000263897 MYO1FO00160 1098 aa16.24■□□□□ 0.19
USE1-201ENST00000263897 TRIM38O00635 465 aa16.24■□□□□ 0.19
USE1-201ENST00000263897 CBFA2T2O43439 604 aa16.24■□□□□ 0.19
USE1-201ENST00000263897 PIAS2O75928 621 aa16.24■□□□□ 0.19
USE1-201ENST00000263897 TM7SF2O76062 418 aa16.24■□□□□ 0.19
USE1-201ENST00000263897 CDK4P11802 303 aa16.24■□□□□ 0.19
USE1-201ENST00000263897 CKMT2P17540 419 aa16.24■□□□□ 0.19
USE1-201ENST00000263897 XPAP23025 273 aaPredicted RBP16.24■□□□□ 0.19
USE1-201ENST00000263897 RABIFP47224 123 aa16.24■□□□□ 0.19
USE1-201ENST00000263897 RGRP47804 291 aa16.24■□□□□ 0.19
USE1-201ENST00000263897 ELP6Q0PNE2 266 aa16.24■□□□□ 0.19
USE1-201ENST00000263897 ZNF211Q13398 564 aaPredicted RBP16.24■□□□□ 0.19
USE1-201ENST00000263897 RFTN1Q14699 578 aaPredicted RBP16.24■□□□□ 0.19
USE1-201ENST00000263897 UGP2Q16851 508 aa16.24■□□□□ 0.19
USE1-201ENST00000263897 DHRS13Q6UX07 377 aa16.24■□□□□ 0.19
USE1-201ENST00000263897 CAMK1DQ8IU85 385 aa16.24■□□□□ 0.19
USE1-201ENST00000263897 OR8K1Q8NGG5 319 aa16.24■□□□□ 0.19
USE1-201ENST00000263897 CXorf40AQ8TE69 158 aa16.24■□□□□ 0.19
USE1-201ENST00000263897 CSPG4P5Q96PW8 444 aa16.24■□□□□ 0.19
USE1-201ENST00000263897 SP110Q9HB58 689 aa16.24■□□□□ 0.19
USE1-201ENST00000263897 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.24■□□□□ 0.19
USE1-201ENST00000263897 ETNK2Q9NVF9 386 aa16.24■□□□□ 0.19
USE1-201ENST00000263897 UCKL1Q9NWZ5 548 aa16.24■□□□□ 0.19
USE1-201ENST00000263897 SIGLEC6O43699 453 aa16.23■□□□□ 0.19
USE1-201ENST00000263897 ACADVLP49748 655 aa16.23■□□□□ 0.19
USE1-201ENST00000263897 PFN3P60673 137 aa16.23■□□□□ 0.19
USE1-201ENST00000263897 HNRNPKP61978 463 aaKnown RBP eCLIP16.23■□□□□ 0.19
USE1-201ENST00000263897 SLC25A11Q02978 314 aaKnown RBP16.23■□□□□ 0.19
USE1-201ENST00000263897 PROX2Q3B8N5 592 aa16.23■□□□□ 0.19
USE1-201ENST00000263897 ZNF542PQ5EBM4 170 aa16.23■□□□□ 0.19
USE1-201ENST00000263897 SPECC1LQ69YQ0 1117 aa16.23■□□□□ 0.19
USE1-201ENST00000263897 BRAT1Q6PJG6 821 aa16.23■□□□□ 0.19
USE1-201ENST00000263897 TMCO3Q6UWJ1 677 aa16.23■□□□□ 0.19
USE1-201ENST00000263897 ZCCHC14Q8WYQ9 949 aaKnown RBP16.23■□□□□ 0.19
USE1-201ENST00000263897 ZNF599Q96NL3 588 aa16.23■□□□□ 0.19
USE1-201ENST00000263897 DNAJC7Q99615 494 aa16.23■□□□□ 0.19
USE1-201ENST00000263897 WRAP53Q9BUR4 548 aaKnown RBP16.23■□□□□ 0.19
USE1-201ENST00000263897 CINPQ9BW66 212 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms